Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 AC104961.1-201ENST00000427605 771 ntBASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 AC104212.2-201ENST00000478813 628 ntBASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 MIR3940-201ENST00000579148 102 ntBASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 ZNF436-AS1-201ENST00000335648 2547 ntBASIC14.31□□□□□ -0.12
SHKBP1Q8TBC3 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 AC092570.1-201ENST00000414446 469 ntBASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 AC113385.2-201ENST00000614465 762 ntBASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHKBP1Q8TBC3 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms