Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 AL354861.1-201ENST00000445213 355 ntBASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 LDHBP1-201ENST00000455730 1119 ntBASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 DPY19L2P5-201ENST00000456300 331 ntBASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 BATF-202ENST00000555504 361 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 AC135983.4-201ENST00000564116 1262 ntBASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 AC018635.2-201ENST00000608625 364 ntBASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD3Q7Z3D4 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 AC079112.1-201ENST00000454972 939 ntBASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 EEF1GP8-201ENST00000506566 1154 ntBASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 AC100858.1-201ENST00000514059 1228 ntBASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 TMCO5B-205ENST00000530020 894 ntBASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 DNM1P30-201ENST00000563586 452 ntBASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 RN7SL470P-201ENST00000583069 259 ntBASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 MIR5572-201ENST00000583188 137 ntBASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 AC140113.1-201ENST00000603467 169 ntBASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 U62317.3-201ENST00000608319 855 ntBASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 ERG-211ENST00000453032 1595 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD3Q7Z3D4 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
LYSMD3Q7Z3D4 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
LYSMD3Q7Z3D4 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
LYSMD3Q7Z3D4 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 AL035696.2-201ENST00000407941 709 ntBASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms