Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CGNL1Q0VF96 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 CICP17-201ENST00000418553 2377 ntBASIC18.36■□□□□ 0.53
CGNL1Q0VF96 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 ST20-AS1-201ENST00000560255 4223 ntBASIC18.36■□□□□ 0.53
CGNL1Q0VF96 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 PTN-202ENST00000393083 1599 ntTSL 5 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 AC010086.2-201ENST00000428616 226 ntBASIC18.36■□□□□ 0.53
CGNL1Q0VF96 GOLGA6L16P-201ENST00000441780 1299 ntBASIC18.36■□□□□ 0.53
CGNL1Q0VF96 SEPHS2P1-201ENST00000511618 1162 ntBASIC18.36■□□□□ 0.53
CGNL1Q0VF96 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 NAV1-210ENST00000593583 726 ntBASIC18.36■□□□□ 0.53
CGNL1Q0VF96 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 KRT8P38-201ENST00000441370 1430 ntBASIC18.36■□□□□ 0.53
CGNL1Q0VF96 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 TBC1D3P1-201ENST00000590047 1693 ntBASIC18.36■□□□□ 0.53
CGNL1Q0VF96 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CGNL1Q0VF96 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 SRL-202ENST00000537996 1814 ntTSL 2 BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 AC005252.3-201ENST00000623855 2258 ntBASIC18.35■□□□□ 0.53
CGNL1Q0VF96 SBF1P1-201ENST00000444527 5631 ntBASIC18.35■□□□□ 0.53
CGNL1Q0VF96 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 RPE-208ENST00000436630 1128 ntTSL 2 BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC18.35■□□□□ 0.53
CGNL1Q0VF96 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC18.35■□□□□ 0.53
CGNL1Q0VF96 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 AL445250.1-201ENST00000641671 2259 ntBASIC18.35■□□□□ 0.53
CGNL1Q0VF96 AL031587.5-201ENST00000624344 1849 ntBASIC18.35■□□□□ 0.53
CGNL1Q0VF96 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 AC034205.3-201ENST00000603595 1376 ntBASIC18.35■□□□□ 0.53
CGNL1Q0VF96 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGNL1Q0VF96 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 AC092053.3-201ENST00000641308 4975 ntBASIC18.34■□□□□ 0.53
CGNL1Q0VF96 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms