Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 SEC14L2-201ENST00000402592 1229 ntTSL 2 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 OR2A14-201ENST00000408899 1012 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 PFN1P3-201ENST00000443612 402 ntBASIC12.44□□□□□ -0.42
CACNA1BQ00975 PFN1P4-201ENST00000450970 402 ntBASIC12.44□□□□□ -0.42
CACNA1BQ00975 C9orf147-203ENST00000460965 446 ntTSL 3 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 RN7SL16P-201ENST00000476316 269 ntBASIC12.44□□□□□ -0.42
CACNA1BQ00975 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 GMDS-AS1-213ENST00000534441 738 ntTSL 3 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 IGHV1OR16-2-201ENST00000564937 349 ntBASIC12.44□□□□□ -0.42
CACNA1BQ00975 MIR4326-201ENST00000582203 59 ntBASIC12.44□□□□□ -0.42
CACNA1BQ00975 MIR4294-201ENST00000584548 76 ntBASIC12.44□□□□□ -0.42
CACNA1BQ00975 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 FKBP4P1-201ENST00000507284 1347 ntBASIC12.44□□□□□ -0.42
CACNA1BQ00975 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 PPP1R32-202ENST00000366212 488 ntTSL 2 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 KCNK16-202ENST00000373229 1248 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 ARF1P2-201ENST00000392493 538 ntBASIC12.44□□□□□ -0.42
CACNA1BQ00975 ITPKB-IT1-201ENST00000412918 746 ntTSL 2 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 MTHFD2P7-201ENST00000483867 983 ntBASIC12.44□□□□□ -0.42
CACNA1BQ00975 RN7SL833P-201ENST00000498758 284 ntBASIC12.44□□□□□ -0.42
CACNA1BQ00975 SNAPC5-205ENST00000563480 920 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 ELOB-205ENST00000572954 331 ntTSL 2 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 AC099343.2-201ENST00000605082 686 ntBASIC12.44□□□□□ -0.42
CACNA1BQ00975 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.44□□□□□ -0.42
CACNA1BQ00975 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CACNA1BQ00975 AC007950.2-201ENST00000615045 2347 ntBASIC12.44□□□□□ -0.42
CACNA1BQ00975 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 NBEAP3-201ENST00000420638 1493 ntBASIC12.43□□□□□ -0.42
CACNA1BQ00975 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 FAM95B1-214ENST00000593216 759 ntTSL 5 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 AC025165.4-201ENST00000602327 433 ntBASIC12.43□□□□□ -0.42
CACNA1BQ00975 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC12.43□□□□□ -0.42
CACNA1BQ00975 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CACNA1BQ00975 RNA5SP84-201ENST00000364740 107 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms