Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SSR1P43307 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.68□□□□□ -0.06
SSR1P43307 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SSR1P43307 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 AL355102.3-201ENST00000554299 1678 ntBASIC14.68□□□□□ -0.06
SSR1P43307 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.68□□□□□ -0.06
SSR1P43307 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC14.67□□□□□ -0.06
SSR1P43307 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 MANEA-AS1-201ENST00000564541 2268 ntBASIC14.67□□□□□ -0.06
SSR1P43307 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC14.67□□□□□ -0.06
SSR1P43307 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 AC102953.2-201ENST00000609755 3026 ntBASIC14.67□□□□□ -0.06
SSR1P43307 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SSR1P43307 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC14.67□□□□□ -0.06
SSR1P43307 KRT17P5-201ENST00000332088 839 ntBASIC14.67□□□□□ -0.06
SSR1P43307 SNORA50C-201ENST00000408535 133 ntBASIC14.67□□□□□ -0.06
SSR1P43307 MIR1908-201ENST00000410394 80 ntBASIC14.67□□□□□ -0.06
SSR1P43307 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.67□□□□□ -0.06
SSR1P43307 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.67□□□□□ -0.06
SSR1P43307 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.67□□□□□ -0.06
SSR1P43307 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.67□□□□□ -0.06
SSR1P43307 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
SSR1P43307 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.67□□□□□ -0.06
SSR1P43307 KRT8P1-201ENST00000557533 1207 ntBASIC14.67□□□□□ -0.06
SSR1P43307 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.67□□□□□ -0.06
SSR1P43307 RN7SL455P-201ENST00000580629 282 ntBASIC14.67□□□□□ -0.06
SSR1P43307 AC138649.2-201ENST00000615886 705 ntBASIC14.67□□□□□ -0.06
SSR1P43307 SNORA50.1-201ENST00000628590 135 ntBASIC14.67□□□□□ -0.06
SSR1P43307 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SSR1P43307 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.67□□□□□ -0.06
SSR1P43307 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.67□□□□□ -0.06
SSR1P43307 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.67□□□□□ -0.06
SSR1P43307 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SSR1P43307 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.67□□□□□ -0.06
SSR1P43307 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SSR1P43307 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
SSR1P43307 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSR1P43307 FRMPD2B-201ENST00000431305 1347 ntBASIC14.66□□□□□ -0.06
SSR1P43307 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 AR-208ENST00000612452 10676 ntTSL 5 BASIC14.66□□□□□ -0.06
SSR1P43307 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC14.66□□□□□ -0.06
SSR1P43307 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.66□□□□□ -0.06
SSR1P43307 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SSR1P43307 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.66□□□□□ -0.06
SSR1P43307 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 ZNF493-208ENST00000599461 1769 ntBASIC14.66□□□□□ -0.06
SSR1P43307 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SSR1P43307 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.66□□□□□ -0.06
SSR1P43307 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SSR1P43307 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SSR1P43307 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SSR1P43307 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.66□□□□□ -0.06
SSR1P43307 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.66□□□□□ -0.06
SSR1P43307 AC108725.1-201ENST00000495472 409 ntBASIC14.66□□□□□ -0.06
SSR1P43307 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.66□□□□□ -0.06
SSR1P43307 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SSR1P43307 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.66□□□□□ -0.06
SSR1P43307 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.66□□□□□ -0.06
SSR1P43307 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SSR1P43307 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.66□□□□□ -0.06
SSR1P43307 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SSR1P43307 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC14.66□□□□□ -0.06
SSR1P43307 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSR1P43307 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms