Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP6P35125 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC17.9■□□□□ 0.46
USP6P35125 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP6P35125 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP6P35125 AC097474.1-201ENST00000506481 1371 ntBASIC17.9■□□□□ 0.46
USP6P35125 AC106872.9-201ENST00000512437 1393 ntBASIC17.9■□□□□ 0.46
USP6P35125 PTPA-219ENST00000435305 530 ntTSL 2 BASIC17.89■□□□□ 0.46
USP6P35125 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
USP6P35125 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC17.89■□□□□ 0.46
USP6P35125 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
USP6P35125 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC17.89■□□□□ 0.46
USP6P35125 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC17.89■□□□□ 0.46
USP6P35125 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC17.89■□□□□ 0.46
USP6P35125 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
USP6P35125 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC17.89■□□□□ 0.46
USP6P35125 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC17.89■□□□□ 0.46
USP6P35125 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC17.89■□□□□ 0.46
USP6P35125 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC17.89■□□□□ 0.46
USP6P35125 AC112220.4-201ENST00000604982 1263 ntBASIC17.89■□□□□ 0.46
USP6P35125 AC136475.9-201ENST00000605240 497 ntBASIC17.89■□□□□ 0.46
USP6P35125 AC108673.2-201ENST00000608909 565 ntBASIC17.89■□□□□ 0.46
USP6P35125 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP6P35125 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
USP6P35125 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP6P35125 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP6P35125 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP6P35125 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP6P35125 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP6P35125 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP6P35125 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP6P35125 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.89■□□□□ 0.45
USP6P35125 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC17.89■□□□□ 0.45
USP6P35125 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP6P35125 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.89■□□□□ 0.45
USP6P35125 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP6P35125 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP6P35125 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP6P35125 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP6P35125 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
USP6P35125 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP6P35125 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP6P35125 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC17.89■□□□□ 0.45
USP6P35125 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC17.89■□□□□ 0.45
USP6P35125 OR7E122P-201ENST00000383606 1017 ntBASIC17.89■□□□□ 0.45
USP6P35125 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC17.89■□□□□ 0.45
USP6P35125 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP6P35125 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC17.89■□□□□ 0.45
USP6P35125 AC092284.1-201ENST00000511386 1289 ntBASIC17.89■□□□□ 0.45
USP6P35125 AC018868.2-201ENST00000559655 1259 ntBASIC17.89■□□□□ 0.45
USP6P35125 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC17.89■□□□□ 0.45
USP6P35125 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC17.89■□□□□ 0.45
USP6P35125 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP6P35125 AL589743.3-201ENST00000604121 517 ntBASIC17.89■□□□□ 0.45
USP6P35125 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC17.89■□□□□ 0.45
USP6P35125 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.89■□□□□ 0.45
USP6P35125 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP6P35125 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP6P35125 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC17.88■□□□□ 0.45
USP6P35125 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
USP6P35125 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 MSNP1-201ENST00000511640 1732 ntBASIC17.88■□□□□ 0.45
USP6P35125 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17.88■□□□□ 0.45
USP6P35125 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 SLC6A6P1-201ENST00000413933 1850 ntBASIC17.88■□□□□ 0.45
USP6P35125 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC17.88■□□□□ 0.45
USP6P35125 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
USP6P35125 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC17.88■□□□□ 0.45
USP6P35125 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 CASP2-203ENST00000392925 616 ntTSL 3 BASIC17.88■□□□□ 0.45
USP6P35125 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
USP6P35125 RNA5SP407-201ENST00000410275 110 ntBASIC17.88■□□□□ 0.45
USP6P35125 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC17.88■□□□□ 0.45
USP6P35125 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC17.88■□□□□ 0.45
USP6P35125 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC17.88■□□□□ 0.45
USP6P35125 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP6P35125 BOLA3P2-201ENST00000586496 323 ntBASIC17.88■□□□□ 0.45
USP6P35125 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC17.88■□□□□ 0.45
USP6P35125 RPS9-213ENST00000626547 476 ntTSL 2 BASIC17.88■□□□□ 0.45
USP6P35125 Z82244.2-201ENST00000632196 448 ntBASIC17.88■□□□□ 0.45
USP6P35125 AC018445.4-201ENST00000624066 2291 ntBASIC17.88■□□□□ 0.45
USP6P35125 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC17.88■□□□□ 0.45
USP6P35125 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
USP6P35125 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms