Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 AC010328.2-201ENST00000597698 1111 ntBASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 AC105233.6-201ENST00000642093 218 ntBASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.34□□□□□ -0.43
BBS1Q8NFJ9 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
BBS1Q8NFJ9 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
BBS1Q8NFJ9 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
BBS1Q8NFJ9 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 MIR3188-201ENST00000583494 85 ntBASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BBS1Q8NFJ9 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms