Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.11□□□□□ -0.31
RSPO4Q2I0M5 CA6-205ENST00000480186 1493 ntTSL 2 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 AL356653.1-201ENST00000402743 360 ntBASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 KRT18P15-201ENST00000458108 1291 ntBASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 AC067942.2-201ENST00000506227 1268 ntBASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 AC010442.2-201ENST00000509301 407 ntBASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 RBP1-206ENST00000617459 667 ntTSL 2 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO4Q2I0M5 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 PGAM1P10-201ENST00000402426 761 ntBASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 EEF1GP3-201ENST00000421044 1288 ntBASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms