Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.92□□□□□ -0.34
RAE1P78406 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.92□□□□□ -0.34
RAE1P78406 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.92□□□□□ -0.34
RAE1P78406 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
RAE1P78406 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 AL512430.1-201ENST00000392575 860 ntBASIC12.92□□□□□ -0.34
RAE1P78406 SNORD23-201ENST00000408876 110 ntBASIC12.92□□□□□ -0.34
RAE1P78406 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.92□□□□□ -0.34
RAE1P78406 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
RAE1P78406 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.92□□□□□ -0.34
RAE1P78406 AC079250.1-201ENST00000456046 531 ntBASIC12.92□□□□□ -0.34
RAE1P78406 RPL18AP3-201ENST00000462885 528 ntBASIC12.92□□□□□ -0.34
RAE1P78406 RN7SL720P-201ENST00000488178 304 ntBASIC12.92□□□□□ -0.34
RAE1P78406 IMP3P2-201ENST00000489760 475 ntBASIC12.92□□□□□ -0.34
RAE1P78406 IGHV1-12-201ENST00000518307 205 ntBASIC12.92□□□□□ -0.34
RAE1P78406 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.92□□□□□ -0.34
RAE1P78406 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.92□□□□□ -0.34
RAE1P78406 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.92□□□□□ -0.34
RAE1P78406 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
RAE1P78406 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.92□□□□□ -0.34
RAE1P78406 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.92□□□□□ -0.34
RAE1P78406 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.92□□□□□ -0.34
RAE1P78406 HERC2P11-201ENST00000562845 725 ntBASIC12.92□□□□□ -0.34
RAE1P78406 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC12.92□□□□□ -0.34
RAE1P78406 AC100756.2-201ENST00000569537 736 ntBASIC12.92□□□□□ -0.34
RAE1P78406 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.92□□□□□ -0.34
RAE1P78406 AL591926.3-201ENST00000611630 238 ntBASIC12.92□□□□□ -0.34
RAE1P78406 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.92□□□□□ -0.34
RAE1P78406 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC12.92□□□□□ -0.34
RAE1P78406 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.92□□□□□ -0.34
RAE1P78406 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RAE1P78406 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 TBC1D3P1-201ENST00000590047 1693 ntBASIC12.92□□□□□ -0.34
RAE1P78406 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.92□□□□□ -0.34
RAE1P78406 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.92□□□□□ -0.34
RAE1P78406 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.92□□□□□ -0.34
RAE1P78406 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RAE1P78406 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAE1P78406 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAE1P78406 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.91□□□□□ -0.34
RAE1P78406 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAE1P78406 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC12.91□□□□□ -0.34
RAE1P78406 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC12.91□□□□□ -0.34
RAE1P78406 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
RAE1P78406 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAE1P78406 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAE1P78406 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.91□□□□□ -0.34
RAE1P78406 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.91□□□□□ -0.34
RAE1P78406 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RAE1P78406 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAE1P78406 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.91□□□□□ -0.34
RAE1P78406 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAE1P78406 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAE1P78406 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAE1P78406 AL662890.1-201ENST00000396818 632 ntBASIC12.91□□□□□ -0.34
RAE1P78406 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.91□□□□□ -0.34
RAE1P78406 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC12.91□□□□□ -0.34
RAE1P78406 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.91□□□□□ -0.34
RAE1P78406 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC12.91□□□□□ -0.34
RAE1P78406 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAE1P78406 IGHJ2P-201ENST00000454480 60 ntBASIC12.91□□□□□ -0.34
RAE1P78406 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC12.91□□□□□ -0.34
RAE1P78406 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAE1P78406 RN7SL375P-201ENST00000492442 298 ntBASIC12.91□□□□□ -0.34
RAE1P78406 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC12.91□□□□□ -0.34
RAE1P78406 AC134698.3-201ENST00000523880 214 ntBASIC12.91□□□□□ -0.34
RAE1P78406 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.91□□□□□ -0.34
RAE1P78406 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC12.91□□□□□ -0.34
RAE1P78406 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.91□□□□□ -0.34
RAE1P78406 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.91□□□□□ -0.34
RAE1P78406 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
RAE1P78406 AC005632.3-201ENST00000605544 308 ntBASIC12.91□□□□□ -0.34
RAE1P78406 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
RAE1P78406 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RAE1P78406 AC051619.9-201ENST00000623237 597 ntBASIC12.91□□□□□ -0.34
RAE1P78406 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.91□□□□□ -0.34
RAE1P78406 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAE1P78406 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAE1P78406 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAE1P78406 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAE1P78406 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAE1P78406 ANKRD20A7P-201ENST00000402318 2414 ntBASIC12.91□□□□□ -0.34
RAE1P78406 KRT8P42-201ENST00000405771 1399 ntBASIC12.91□□□□□ -0.34
RAE1P78406 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms