Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.38□□□□□ -0.43
APOBEC1P41238 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.38□□□□□ -0.43
APOBEC1P41238 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
APOBEC1P41238 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
APOBEC1P41238 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
APOBEC1P41238 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.38□□□□□ -0.43
APOBEC1P41238 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.38□□□□□ -0.43
APOBEC1P41238 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
APOBEC1P41238 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.37□□□□□ -0.43
APOBEC1P41238 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.37□□□□□ -0.43
APOBEC1P41238 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.37□□□□□ -0.43
APOBEC1P41238 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
APOBEC1P41238 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 GUCY2EP-203ENST00000531117 1918 ntBASIC12.37□□□□□ -0.43
APOBEC1P41238 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.37□□□□□ -0.43
APOBEC1P41238 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.37□□□□□ -0.43
APOBEC1P41238 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
APOBEC1P41238 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.37□□□□□ -0.43
APOBEC1P41238 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC12.37□□□□□ -0.43
APOBEC1P41238 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.37□□□□□ -0.43
APOBEC1P41238 AC041040.1-201ENST00000425197 460 ntBASIC12.37□□□□□ -0.43
APOBEC1P41238 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.37□□□□□ -0.43
APOBEC1P41238 FTLP1-201ENST00000449155 526 ntBASIC12.37□□□□□ -0.43
APOBEC1P41238 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.37□□□□□ -0.43
APOBEC1P41238 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.37□□□□□ -0.43
APOBEC1P41238 RNA5SP406-201ENST00000516106 112 ntBASIC12.37□□□□□ -0.43
APOBEC1P41238 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.37□□□□□ -0.43
APOBEC1P41238 AP002803.1-201ENST00000528836 498 ntBASIC12.37□□□□□ -0.43
APOBEC1P41238 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
APOBEC1P41238 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
APOBEC1P41238 AC068867.1-201ENST00000559855 150 ntBASIC12.37□□□□□ -0.43
APOBEC1P41238 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.37□□□□□ -0.43
APOBEC1P41238 AC007952.4-201ENST00000573866 637 ntBASIC12.37□□□□□ -0.43
APOBEC1P41238 RN7SL470P-201ENST00000583069 259 ntBASIC12.37□□□□□ -0.43
APOBEC1P41238 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.37□□□□□ -0.43
APOBEC1P41238 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.37□□□□□ -0.43
APOBEC1P41238 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
APOBEC1P41238 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.37□□□□□ -0.43
APOBEC1P41238 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.37□□□□□ -0.43
APOBEC1P41238 AC007881.3-201ENST00000608897 607 ntBASIC12.37□□□□□ -0.43
APOBEC1P41238 AC025262.2-201ENST00000623975 1056 ntBASIC12.37□□□□□ -0.43
APOBEC1P41238 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 AC090502.4-201ENST00000551714 1386 ntBASIC12.37□□□□□ -0.43
APOBEC1P41238 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
APOBEC1P41238 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.37□□□□□ -0.43
APOBEC1P41238 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
APOBEC1P41238 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
APOBEC1P41238 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.37□□□□□ -0.43
APOBEC1P41238 AC010970.1-201ENST00000445125 1848 ntBASIC12.37□□□□□ -0.43
APOBEC1P41238 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC12.37□□□□□ -0.43
APOBEC1P41238 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.37□□□□□ -0.43
APOBEC1P41238 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBEC1P41238 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
APOBEC1P41238 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.37□□□□□ -0.43
APOBEC1P41238 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOBEC1P41238 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOBEC1P41238 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.36□□□□□ -0.43
APOBEC1P41238 AC012531.1-201ENST00000562848 2680 ntBASIC12.36□□□□□ -0.43
APOBEC1P41238 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
APOBEC1P41238 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.36□□□□□ -0.43
APOBEC1P41238 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.36□□□□□ -0.43
APOBEC1P41238 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOBEC1P41238 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOBEC1P41238 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOBEC1P41238 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms