Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.83□□□□□ -0.36
NR4A1P22736 AL358472.3-201ENST00000608147 415 ntBASIC12.83□□□□□ -0.36
NR4A1P22736 BX088702.1-201ENST00000610784 235 ntBASIC12.83□□□□□ -0.36
NR4A1P22736 MIR6799-201ENST00000620297 69 ntBASIC12.83□□□□□ -0.36
NR4A1P22736 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.83□□□□□ -0.36
NR4A1P22736 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NR4A1P22736 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
NR4A1P22736 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC12.83□□□□□ -0.36
NR4A1P22736 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC12.83□□□□□ -0.36
NR4A1P22736 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NR4A1P22736 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
NR4A1P22736 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.83□□□□□ -0.36
NR4A1P22736 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC12.83□□□□□ -0.36
NR4A1P22736 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC12.82□□□□□ -0.36
NR4A1P22736 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 AC010336.1-201ENST00000539278 4739 ntBASIC12.82□□□□□ -0.36
NR4A1P22736 AL590440.2-201ENST00000641973 1595 ntBASIC12.82□□□□□ -0.36
NR4A1P22736 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NR4A1P22736 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.82□□□□□ -0.36
NR4A1P22736 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.82□□□□□ -0.36
NR4A1P22736 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.82□□□□□ -0.36
NR4A1P22736 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
NR4A1P22736 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 FAM86MP-201ENST00000340703 885 ntBASIC12.82□□□□□ -0.36
NR4A1P22736 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.82□□□□□ -0.36
NR4A1P22736 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.82□□□□□ -0.36
NR4A1P22736 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 AC100850.1-201ENST00000506768 649 ntBASIC12.82□□□□□ -0.36
NR4A1P22736 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.82□□□□□ -0.36
NR4A1P22736 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.82□□□□□ -0.36
NR4A1P22736 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.82□□□□□ -0.36
NR4A1P22736 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.82□□□□□ -0.36
NR4A1P22736 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
NR4A1P22736 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.82□□□□□ -0.36
NR4A1P22736 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.82□□□□□ -0.36
NR4A1P22736 AC008825.2-201ENST00000603374 718 ntBASIC12.82□□□□□ -0.36
NR4A1P22736 AC091271.1-201ENST00000611877 1162 ntBASIC12.82□□□□□ -0.36
NR4A1P22736 AL136301.1-201ENST00000615830 422 ntBASIC12.82□□□□□ -0.36
NR4A1P22736 OR2I1P-208ENST00000641137 4948 ntBASIC12.82□□□□□ -0.36
NR4A1P22736 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.82□□□□□ -0.36
NR4A1P22736 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
NR4A1P22736 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC12.82□□□□□ -0.36
NR4A1P22736 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.82□□□□□ -0.36
NR4A1P22736 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.82□□□□□ -0.36
NR4A1P22736 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.82□□□□□ -0.36
NR4A1P22736 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.82□□□□□ -0.36
NR4A1P22736 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NR4A1P22736 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NR4A1P22736 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.81□□□□□ -0.36
NR4A1P22736 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NR4A1P22736 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
NR4A1P22736 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NR4A1P22736 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NR4A1P22736 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NR4A1P22736 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms