Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.5□□□□□ -0.41
HTR1AP08908 KRT17P7-201ENST00000451704 1104 ntBASIC12.5□□□□□ -0.41
HTR1AP08908 RN7SL837P-201ENST00000463010 287 ntBASIC12.5□□□□□ -0.41
HTR1AP08908 RN7SL752P-201ENST00000463779 287 ntBASIC12.5□□□□□ -0.41
HTR1AP08908 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.5□□□□□ -0.41
HTR1AP08908 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC12.5□□□□□ -0.41
HTR1AP08908 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
HTR1AP08908 AC003686.1-201ENST00000550956 1034 ntBASIC12.5□□□□□ -0.41
HTR1AP08908 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.5□□□□□ -0.41
HTR1AP08908 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.5□□□□□ -0.41
HTR1AP08908 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.5□□□□□ -0.41
HTR1AP08908 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
HTR1AP08908 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.5□□□□□ -0.41
HTR1AP08908 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
HTR1AP08908 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC12.5□□□□□ -0.41
HTR1AP08908 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
HTR1AP08908 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC12.5□□□□□ -0.41
HTR1AP08908 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
HTR1AP08908 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
HTR1AP08908 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC12.5□□□□□ -0.41
HTR1AP08908 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
HTR1AP08908 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HTR1AP08908 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC12.49□□□□□ -0.41
HTR1AP08908 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC12.49□□□□□ -0.41
HTR1AP08908 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
HTR1AP08908 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC12.49□□□□□ -0.41
HTR1AP08908 SHROOM2P1-201ENST00000434773 2384 ntBASIC12.49□□□□□ -0.41
HTR1AP08908 DDO-201ENST00000368923 1953 ntTSL 2 BASIC12.49□□□□□ -0.41
HTR1AP08908 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.49□□□□□ -0.41
HTR1AP08908 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.49□□□□□ -0.41
HTR1AP08908 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HTR1AP08908 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.49□□□□□ -0.41
HTR1AP08908 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 AC138028.6-201ENST00000616106 1482 ntBASIC12.49□□□□□ -0.41
HTR1AP08908 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.49□□□□□ -0.41
HTR1AP08908 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.49□□□□□ -0.41
HTR1AP08908 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.49□□□□□ -0.41
HTR1AP08908 AC098614.1-201ENST00000368528 745 ntBASIC12.49□□□□□ -0.41
HTR1AP08908 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.49□□□□□ -0.41
HTR1AP08908 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
HTR1AP08908 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 AC092580.1-201ENST00000433998 658 ntBASIC12.49□□□□□ -0.41
HTR1AP08908 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.49□□□□□ -0.41
HTR1AP08908 BCRP1-201ENST00000444246 691 ntBASIC12.49□□□□□ -0.41
HTR1AP08908 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.49□□□□□ -0.41
HTR1AP08908 HIST2H2BB-201ENST00000449108 381 ntBASIC12.49□□□□□ -0.41
HTR1AP08908 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
HTR1AP08908 TERF1P3-201ENST00000505638 1227 ntBASIC12.49□□□□□ -0.41
HTR1AP08908 USP32P1-208ENST00000506594 1164 ntBASIC12.49□□□□□ -0.41
HTR1AP08908 KRT90P-201ENST00000549264 1064 ntBASIC12.49□□□□□ -0.41
HTR1AP08908 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
HTR1AP08908 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.49□□□□□ -0.41
HTR1AP08908 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.49□□□□□ -0.41
HTR1AP08908 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.49□□□□□ -0.41
HTR1AP08908 AC233724.13-201ENST00000598383 410 ntBASIC12.49□□□□□ -0.41
HTR1AP08908 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.49□□□□□ -0.41
HTR1AP08908 AL096865.1-201ENST00000606796 927 ntBASIC12.49□□□□□ -0.41
HTR1AP08908 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.49□□□□□ -0.41
HTR1AP08908 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 AC015967.2-201ENST00000624092 234 ntBASIC12.49□□□□□ -0.41
HTR1AP08908 AC006435.4-201ENST00000625037 234 ntBASIC12.49□□□□□ -0.41
HTR1AP08908 AL356737.1-201ENST00000634391 234 ntBASIC12.49□□□□□ -0.41
HTR1AP08908 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
HTR1AP08908 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
HTR1AP08908 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC12.49□□□□□ -0.41
HTR1AP08908 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
HTR1AP08908 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC12.49□□□□□ -0.41
HTR1AP08908 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HTR1AP08908 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms