Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TPM3P06753 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 CYP4F23P-201ENST00000593402 1579 ntBASIC15.41■□□□□ 0.06
TPM3P06753 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC15.4■□□□□ 0.06
TPM3P06753 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.4■□□□□ 0.06
TPM3P06753 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 GBP1P1-201ENST00000394662 1740 ntBASIC15.4■□□□□ 0.06
TPM3P06753 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC15.4■□□□□ 0.06
TPM3P06753 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TPM3P06753 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC15.4■□□□□ 0.06
TPM3P06753 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TPM3P06753 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC15.4■□□□□ 0.06
TPM3P06753 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC15.4■□□□□ 0.06
TPM3P06753 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TPM3P06753 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.4■□□□□ 0.06
TPM3P06753 KRT18P36-201ENST00000411618 1276 ntBASIC15.4■□□□□ 0.06
TPM3P06753 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.4■□□□□ 0.06
TPM3P06753 KRT43P-201ENST00000434019 910 ntBASIC15.4■□□□□ 0.06
TPM3P06753 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.4■□□□□ 0.06
TPM3P06753 AC100850.1-201ENST00000506768 649 ntBASIC15.4■□□□□ 0.06
TPM3P06753 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.4■□□□□ 0.06
TPM3P06753 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.4■□□□□ 0.06
TPM3P06753 CR383656.12-201ENST00000549567 513 ntBASIC15.4■□□□□ 0.06
TPM3P06753 AL160314.3-201ENST00000556041 767 ntBASIC15.4■□□□□ 0.06
TPM3P06753 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.4■□□□□ 0.06
TPM3P06753 AC008735.3-201ENST00000596646 500 ntBASIC15.4■□□□□ 0.06
TPM3P06753 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.4■□□□□ 0.06
TPM3P06753 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC15.4■□□□□ 0.06
TPM3P06753 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC15.4■□□□□ 0.06
TPM3P06753 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC15.4■□□□□ 0.06
TPM3P06753 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 AL359510.2-201ENST00000624958 2249 ntBASIC15.4■□□□□ 0.06
TPM3P06753 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM3P06753 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC15.4■□□□□ 0.06
TPM3P06753 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC15.39■□□□□ 0.06
TPM3P06753 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC15.39■□□□□ 0.06
TPM3P06753 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TPM3P06753 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 GDA-203ENST00000376986 1771 ntTSL 2 BASIC15.39■□□□□ 0.05
TPM3P06753 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.39■□□□□ 0.05
TPM3P06753 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TPM3P06753 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TPM3P06753 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TPM3P06753 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC15.39■□□□□ 0.05
TPM3P06753 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 FAM90A17P-201ENST00000533716 1957 ntBASIC15.39■□□□□ 0.05
TPM3P06753 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TPM3P06753 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.39■□□□□ 0.05
TPM3P06753 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.39■□□□□ 0.05
TPM3P06753 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 KLF2P1-201ENST00000447438 1042 ntBASIC15.39■□□□□ 0.05
TPM3P06753 EIF4HP1-201ENST00000453115 687 ntBASIC15.39■□□□□ 0.05
TPM3P06753 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.39■□□□□ 0.05
TPM3P06753 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.39■□□□□ 0.05
TPM3P06753 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.39■□□□□ 0.05
TPM3P06753 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC15.39■□□□□ 0.05
TPM3P06753 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TPM3P06753 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.39■□□□□ 0.05
TPM3P06753 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TPM3P06753 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.39■□□□□ 0.05
TPM3P06753 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
TPM3P06753 AL096865.1-201ENST00000606796 927 ntBASIC15.39■□□□□ 0.05
TPM3P06753 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.39■□□□□ 0.05
TPM3P06753 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TPM3P06753 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms