Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CNOT4O95628 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CNOT4O95628 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CNOT4O95628 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC12.27□□□□□ -0.45
CNOT4O95628 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.27□□□□□ -0.45
CNOT4O95628 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.27□□□□□ -0.45
CNOT4O95628 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.27□□□□□ -0.45
CNOT4O95628 KRT18P62-201ENST00000446618 1287 ntBASIC12.27□□□□□ -0.45
CNOT4O95628 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.27□□□□□ -0.45
CNOT4O95628 DPY19L2P5-201ENST00000456300 331 ntBASIC12.27□□□□□ -0.45
CNOT4O95628 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.27□□□□□ -0.45
CNOT4O95628 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC12.27□□□□□ -0.45
CNOT4O95628 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.27□□□□□ -0.45
CNOT4O95628 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CNOT4O95628 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC12.27□□□□□ -0.45
CNOT4O95628 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CNOT4O95628 LINC00244-201ENST00000625073 613 ntBASIC12.27□□□□□ -0.45
CNOT4O95628 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CNOT4O95628 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CNOT4O95628 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CNOT4O95628 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CNOT4O95628 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CNOT4O95628 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.27□□□□□ -0.45
CNOT4O95628 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CNOT4O95628 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CNOT4O95628 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CNOT4O95628 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CNOT4O95628 AL356585.2-201ENST00000625078 2396 ntBASIC12.27□□□□□ -0.45
CNOT4O95628 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC12.27□□□□□ -0.45
CNOT4O95628 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CNOT4O95628 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CNOT4O95628 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.27□□□□□ -0.45
CNOT4O95628 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CNOT4O95628 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CNOT4O95628 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CNOT4O95628 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.27□□□□□ -0.45
CNOT4O95628 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.27□□□□□ -0.45
CNOT4O95628 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CNOT4O95628 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CNOT4O95628 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CNOT4O95628 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.27□□□□□ -0.45
CNOT4O95628 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CNOT4O95628 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CNOT4O95628 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CNOT4O95628 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.26□□□□□ -0.45
CNOT4O95628 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 AC093462.1-201ENST00000621167 1683 ntBASIC12.26□□□□□ -0.45
CNOT4O95628 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.26□□□□□ -0.45
CNOT4O95628 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.26□□□□□ -0.45
CNOT4O95628 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.26□□□□□ -0.45
CNOT4O95628 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.26□□□□□ -0.45
CNOT4O95628 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC12.26□□□□□ -0.45
CNOT4O95628 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 RN7SKP109-201ENST00000410592 316 ntBASIC12.26□□□□□ -0.45
CNOT4O95628 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.26□□□□□ -0.45
CNOT4O95628 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.26□□□□□ -0.45
CNOT4O95628 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.26□□□□□ -0.45
CNOT4O95628 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CNOT4O95628 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.26□□□□□ -0.45
CNOT4O95628 RN7SL23P-201ENST00000484055 275 ntBASIC12.26□□□□□ -0.45
CNOT4O95628 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.26□□□□□ -0.45
CNOT4O95628 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CNOT4O95628 TMCO5B-205ENST00000530020 894 ntBASIC12.26□□□□□ -0.45
CNOT4O95628 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC12.26□□□□□ -0.45
CNOT4O95628 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.26□□□□□ -0.45
CNOT4O95628 AC141586.1-203ENST00000567242 366 ntBASIC12.26□□□□□ -0.45
CNOT4O95628 MIR4326-201ENST00000582203 59 ntBASIC12.26□□□□□ -0.45
CNOT4O95628 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.26□□□□□ -0.45
CNOT4O95628 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CNOT4O95628 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.26□□□□□ -0.45
CNOT4O95628 AL009176.1-201ENST00000607876 650 ntBASIC12.26□□□□□ -0.45
CNOT4O95628 AC107464.3-201ENST00000609172 737 ntBASIC12.26□□□□□ -0.45
CNOT4O95628 AC073911.3-201ENST00000624401 631 ntBASIC12.26□□□□□ -0.45
CNOT4O95628 AC005618.3-201ENST00000624928 458 ntBASIC12.26□□□□□ -0.45
CNOT4O95628 AC127024.7-201ENST00000625101 200 ntBASIC12.26□□□□□ -0.45
CNOT4O95628 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.26□□□□□ -0.45
CNOT4O95628 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.26□□□□□ -0.45
CNOT4O95628 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
CNOT4O95628 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.26□□□□□ -0.45
CNOT4O95628 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
CNOT4O95628 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.26□□□□□ -0.45
CNOT4O95628 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms