Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 EEF1GP4-201ENST00000467631 1307 ntBASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 AC012184.3-201ENST00000562077 1471 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 MIRLET7I-201ENST00000362309 84 ntBASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 AP000350.1-201ENST00000443377 532 ntBASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 LYPD8-202ENST00000590317 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIMBP3Q9UFD9 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 IP6K3-202ENST00000451316 2012 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 SETDB1-202ENST00000368962 1478 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 AC007950.2-201ENST00000615045 2347 ntBASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 SP100-203ENST00000409112 2198 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 LRTOMT-205ENST00000423494 1270 ntTSL 2 BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 AL161937.2-202ENST00000435301 733 ntTSL 3 BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 AL354733.3-201ENST00000448389 390 ntTSL 3 BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 EHF-209ENST00000531728 485 ntTSL 2 BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 AC109631.1-201ENST00000559695 781 ntBASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 AC068722.1-201ENST00000560705 861 ntTSL 3 BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 MIR4327-201ENST00000581194 85 ntBASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 AC005828.4-201ENST00000584608 552 ntTSL 4 BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 OS9-218ENST00000551035 2246 ntTSL 2 BASIC20.34■□□□□ 0.85
RIMBP3Q9UFD9 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 WSB1-202ENST00000348811 1611 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 AC078850.1-201ENST00000514265 1623 ntTSL 2 BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 AC004585.2-201ENST00000624090 1473 ntBASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 AMD1P4-201ENST00000299540 1345 ntBASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RIMBP3Q9UFD9 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 KITLG-203ENST00000357116 565 ntTSL 4 BASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 KANK1P1-201ENST00000400619 1234 ntBASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 AL928921.1-201ENST00000441033 708 ntTSL 3 BASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 LINC01270-202ENST00000457853 943 ntTSL 3 BASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 AC233724.12-201ENST00000512227 594 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 SAA2-SAA4-201ENST00000524555 743 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 AC009065.7-201ENST00000561544 580 ntTSL 3 BASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 MIR4747-201ENST00000584057 54 ntBASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 ZNF766-208ENST00000600821 568 ntTSL 4 BASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 IPO7-208ENST00000630083 195 ntTSL 5 BASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
RIMBP3Q9UFD9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 CPLX4-201ENST00000299721 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 TRAV3-201ENST00000390425 519 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 AL354714.2-201ENST00000425270 1097 ntBASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 U62317.1-201ENST00000434237 157 ntTSL 3 BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 Z98885.1-201ENST00000444011 465 ntBASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 VDAC1P13-201ENST00000447826 859 ntBASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 AL392023.1-201ENST00000555655 531 ntTSL 3 BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 AC020897.1-201ENST00000587702 561 ntTSL 4 BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 LINC00969-263ENST00000626007 839 ntTSL 5 BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms