Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 AL512430.1-201ENST00000392575 860 ntBASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 AC092573.1-201ENST00000433054 884 ntBASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 NDUFS6P1-201ENST00000485187 316 ntBASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 PRKXP1-201ENST00000561423 1122 ntBASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 AC012073.1-201ENST00000606114 1108 ntBASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 AC009145.4-201ENST00000625119 1294 ntBASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 SALL4P6-201ENST00000429385 1691 ntBASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 PDXDC2P-206ENST00000534700 1315 ntBASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 AC009474.1-201ENST00000455096 1565 ntBASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 NRADDP-202ENST00000641269 1585 ntBASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 AC072061.1-201ENST00000569710 2234 ntBASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 AL358781.1-202ENST00000321081 1360 ntBASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 ODCP-201ENST00000459650 1639 ntBASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 AC015909.5-201ENST00000624336 2266 ntBASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 AL391647.1-201ENST00000395664 511 ntBASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 DKKL1P1-201ENST00000400550 698 ntBASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 GUSBP10-201ENST00000417412 665 ntBASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 AC005722.1-201ENST00000431878 964 ntBASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 MIR3940-201ENST00000579148 102 ntBASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 AL356740.1-201ENST00000602192 1297 ntBASIC12.34□□□□□ -0.43
PARPBPQ9NWS1 AL049840.2-201ENST00000602722 535 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms