Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 AC005034.1-201ENST00000426657 489 ntBASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 HILS1-202ENST00000545329 423 ntBASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 AC022364.1-202ENST00000617468 2409 ntBASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 AC067931.2-201ENST00000623655 2003 ntBASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 AC106818.1-201ENST00000623223 3242 ntBASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 AC132825.4-202ENST00000578792 434 ntBASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 NAP1L6-202ENST00000641404 1222 ntBASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR2J2Q9GZM3 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.71□□□□□ -0.38
POLR2J2Q9GZM3 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
POLR2J2Q9GZM3 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
POLR2J2Q9GZM3 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
POLR2J2Q9GZM3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.71□□□□□ -0.38
POLR2J2Q9GZM3 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms