Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHKBP1Q8TBC3 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHKBP1Q8TBC3 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHKBP1Q8TBC3 TCAM1P-207ENST00000485295 1537 ntBASIC14.36□□□□□ -0.11
SHKBP1Q8TBC3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 BEND3P3-201ENST00000611030 2440 ntBASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 OR10N1P-201ENST00000392758 869 ntBASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 FAU-202ENST00000434372 533 ntTSL 2 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 ALG1L7P-201ENST00000502317 768 ntBASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 APOC1-209ENST00000592885 562 ntTSL 3 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 CSTP2-201ENST00000610599 398 ntBASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 AC139713.2-207ENST00000641556 1292 ntBASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 MIR497HG-202ENST00000572453 3838 ntBASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHKBP1Q8TBC3 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 AL157996.1-201ENST00000624684 2299 ntBASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 AL122018.1-201ENST00000446607 2310 ntBASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 AL451000.1-201ENST00000451300 1186 ntBASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 TBC1D3P6-201ENST00000505954 962 ntBASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 URAHP-205ENST00000610227 398 ntBASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 AC026120.2-201ENST00000617239 309 ntBASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms