Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AL355493.1-201ENST00000422707 808 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 TRBV22-1-201ENST00000424543 337 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 PSMD6-209ENST00000482510 1176 ntTSL 5 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 RN7SL328P-201ENST00000484033 300 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 CNDP2-228ENST00000584768 897 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AC015656.1-201ENST00000624209 3578 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 SLC25A6P1-201ENST00000412123 775 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 IL6RP1-201ENST00000417848 1273 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 Z93242.2-201ENST00000445666 394 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 RBP5-202ENST00000542370 564 ntTSL 2 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 MIR4296-201ENST00000581038 88 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 EPM2A-214ENST00000638783 801 ntTSL 5 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 EPM2A-229ENST00000640980 647 ntTSL 3 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 HNRNPLP1-201ENST00000421896 1501 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 CDK7-202ENST00000502604 1455 ntTSL 5 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 OOEP-201ENST00000370359 478 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 PAGE4-202ENST00000376141 487 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 CD33-202ENST00000391796 1089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AP001610.1-201ENST00000411427 1116 ntTSL 5 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 HLA-DRB6-202ENST00000437183 1090 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AC069421.1-201ENST00000447462 323 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AC245884.7-201ENST00000514037 356 ntBASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 FAM95B1-211ENST00000592053 1541 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 AL669942.1-203ENST00000610972 1541 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
VPS13DQ5THJ4 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 DDX6P2-201ENST00000619520 1455 ntBASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 FOLR1-201ENST00000312293 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 FAM45BP-201ENST00000408950 1074 ntBASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 SKA1-203ENST00000417656 1095 ntTSL 2 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 AL160313.2-201ENST00000555875 493 ntTSL 3 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 CALM3-206ENST00000594523 540 ntTSL 4 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 AC068134.4-201ENST00000613365 122 ntBASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 AL109618.3-201ENST00000622748 430 ntBASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 AC130469.2-201ENST00000625112 1092 ntBASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 PRSS2-205ENST00000632998 817 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 RABL2A-207ENST00000409875 2282 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 LINC01551-201ENST00000399387 1581 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 AC020763.2-201ENST00000623155 1255 ntBASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 AL358215.3-201ENST00000640695 1186 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 HINFP-204ENST00000527410 1466 ntTSL 2 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 IST1-221ENST00000544564 1500 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
VPS13DQ5THJ4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms