Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 PPP1R2P10-201ENST00000393023 595 ntBASIC16.78■□□□□ 0.28
RC3H1Q5TC82 THAP4-203ENST00000402545 833 ntTSL 5 BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 AC092284.1-201ENST00000511386 1289 ntBASIC16.78■□□□□ 0.28
RC3H1Q5TC82 PEBP1P1-201ENST00000554856 510 ntBASIC16.78■□□□□ 0.28
RC3H1Q5TC82 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 MIR4640-201ENST00000581824 90 ntBASIC16.78■□□□□ 0.28
RC3H1Q5TC82 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC16.78■□□□□ 0.28
RC3H1Q5TC82 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RC3H1Q5TC82 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 AC106881.1-201ENST00000605849 3329 ntBASIC16.77■□□□□ 0.28
RC3H1Q5TC82 AGAP10P-201ENST00000454844 2418 ntBASIC16.77■□□□□ 0.28
RC3H1Q5TC82 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 MIR181D-201ENST00000384853 137 ntBASIC16.77■□□□□ 0.28
RC3H1Q5TC82 AL391903.1-201ENST00000407513 365 ntBASIC16.77■□□□□ 0.28
RC3H1Q5TC82 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 NEMF-210ENST00000556672 590 ntTSL 2 BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 AC018868.2-201ENST00000559655 1259 ntBASIC16.77■□□□□ 0.28
RC3H1Q5TC82 AC120498.5-201ENST00000561757 299 ntBASIC16.77■□□□□ 0.28
RC3H1Q5TC82 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 AP006248.1-201ENST00000610471 67 ntBASIC16.77■□□□□ 0.28
RC3H1Q5TC82 AL591926.3-201ENST00000611630 238 ntBASIC16.77■□□□□ 0.28
RC3H1Q5TC82 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC16.77■□□□□ 0.28
RC3H1Q5TC82 MIR6165-201ENST00000614803 84 ntBASIC16.77■□□□□ 0.28
RC3H1Q5TC82 Z99916.3-201ENST00000623422 1080 ntBASIC16.77■□□□□ 0.28
RC3H1Q5TC82 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RC3H1Q5TC82 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RC3H1Q5TC82 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RC3H1Q5TC82 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RC3H1Q5TC82 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RC3H1Q5TC82 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.77■□□□□ 0.27
RC3H1Q5TC82 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RC3H1Q5TC82 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.77■□□□□ 0.27
RC3H1Q5TC82 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RC3H1Q5TC82 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
RC3H1Q5TC82 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RC3H1Q5TC82 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RC3H1Q5TC82 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RC3H1Q5TC82 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RC3H1Q5TC82 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms