Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 AP000920.1-201ENST00000531824 344 ntBASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 RN7SL524P-201ENST00000581152 300 ntBASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 AC245369.7-201ENST00000631386 350 ntBASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 AL008638.4-201ENST00000624792 1315 ntBASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CTC1Q2NKJ3 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 U3.5-201ENST00000363448 216 ntBASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 AIG1-203ENST00000367596 559 ntTSL 2 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 DKKL1P1-201ENST00000400550 698 ntBASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 AL121949.3-201ENST00000406684 385 ntBASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 KRT19P4-201ENST00000443208 943 ntBASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 AL136084.1-201ENST00000449172 318 ntBASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 KRT18P15-201ENST00000458108 1291 ntBASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 RN7SL578P-201ENST00000477781 283 ntBASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 INO80E-209ENST00000567254 625 ntTSL 2 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 AC072061.1-201ENST00000569710 2234 ntBASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.61□□□□□ -0.07
CTC1Q2NKJ3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CTC1Q2NKJ3 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC14.6□□□□□ -0.07
CTC1Q2NKJ3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CTC1Q2NKJ3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
CTC1Q2NKJ3 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.6□□□□□ -0.07
CTC1Q2NKJ3 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.6□□□□□ -0.07
CTC1Q2NKJ3 MIR600HG-201ENST00000449175 5984 ntBASIC14.6□□□□□ -0.07
CTC1Q2NKJ3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CTC1Q2NKJ3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CTC1Q2NKJ3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.6□□□□□ -0.07
CTC1Q2NKJ3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms