Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12.36□□□□□ -0.43
SUMO3P55854 RPL35P9-201ENST00000446059 350 ntBASIC12.36□□□□□ -0.43
SUMO3P55854 GNG10P1-201ENST00000452289 199 ntBASIC12.36□□□□□ -0.43
SUMO3P55854 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC12.36□□□□□ -0.43
SUMO3P55854 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.36□□□□□ -0.43
SUMO3P55854 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC12.36□□□□□ -0.43
SUMO3P55854 AC135983.4-201ENST00000564116 1262 ntBASIC12.36□□□□□ -0.43
SUMO3P55854 CES1P2-201ENST00000566467 1242 ntBASIC12.36□□□□□ -0.43
SUMO3P55854 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.36□□□□□ -0.43
SUMO3P55854 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC12.36□□□□□ -0.43
SUMO3P55854 CSTP2-201ENST00000610599 398 ntBASIC12.36□□□□□ -0.43
SUMO3P55854 AC073911.3-201ENST00000624401 631 ntBASIC12.36□□□□□ -0.43
SUMO3P55854 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC12.36□□□□□ -0.43
SUMO3P55854 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.36□□□□□ -0.43
SUMO3P55854 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.36□□□□□ -0.43
SUMO3P55854 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SUMO3P55854 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.36□□□□□ -0.43
SUMO3P55854 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SUMO3P55854 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.36□□□□□ -0.43
SUMO3P55854 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
SUMO3P55854 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC12.36□□□□□ -0.43
SUMO3P55854 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
SUMO3P55854 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SUMO3P55854 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SUMO3P55854 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
SUMO3P55854 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SUMO3P55854 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.35□□□□□ -0.43
SUMO3P55854 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.35□□□□□ -0.43
SUMO3P55854 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
SUMO3P55854 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.35□□□□□ -0.43
SUMO3P55854 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
SUMO3P55854 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.35□□□□□ -0.43
SUMO3P55854 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC12.35□□□□□ -0.43
SUMO3P55854 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.35□□□□□ -0.43
SUMO3P55854 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC12.35□□□□□ -0.43
SUMO3P55854 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC12.35□□□□□ -0.43
SUMO3P55854 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.35□□□□□ -0.43
SUMO3P55854 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC12.35□□□□□ -0.43
SUMO3P55854 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SUMO3P55854 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC12.35□□□□□ -0.43
SUMO3P55854 OR2A1-AS1-210ENST00000496968 531 ntBASIC12.35□□□□□ -0.43
SUMO3P55854 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.35□□□□□ -0.43
SUMO3P55854 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
SUMO3P55854 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.35□□□□□ -0.43
SUMO3P55854 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.35□□□□□ -0.43
SUMO3P55854 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC12.35□□□□□ -0.43
SUMO3P55854 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
SUMO3P55854 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SUMO3P55854 AC087045.2-201ENST00000606279 1003 ntBASIC12.35□□□□□ -0.43
SUMO3P55854 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 AC002044.2-201ENST00000624910 970 ntBASIC12.35□□□□□ -0.43
SUMO3P55854 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC12.35□□□□□ -0.43
SUMO3P55854 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.35□□□□□ -0.43
SUMO3P55854 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SUMO3P55854 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
SUMO3P55854 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SUMO3P55854 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.35□□□□□ -0.43
SUMO3P55854 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC12.35□□□□□ -0.43
SUMO3P55854 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.35□□□□□ -0.43
SUMO3P55854 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SUMO3P55854 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.34□□□□□ -0.43
SUMO3P55854 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC12.34□□□□□ -0.43
SUMO3P55854 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms