Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 RANGAP1-207ENST00000455915 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 NELL2-204ENST00000437801 3279 ntTSL 2 BASIC8.64□□□□□ -1.03
PCP4P48539 GOLGA6D-202ENST00000618219 3210 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
PCP4P48539 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC8.64□□□□□ -1.03
PCP4P48539 CNKSR2-201ENST00000279451 4478 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 BMP4-202ENST00000417573 1784 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
PCP4P48539 AC019069.1-201ENST00000610008 1333 ntBASIC8.64□□□□□ -1.03
PCP4P48539 KCTD1-201ENST00000317932 1715 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
PCP4P48539 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 CCDC14-203ENST00000409697 2962 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
PCP4P48539 WDR53-204ENST00000433160 887 ntTSL 5 BASIC8.64□□□□□ -1.03
PCP4P48539 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC8.64□□□□□ -1.03
PCP4P48539 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 CASP6-205ENST00000505486 538 ntTSL 4 BASIC8.64□□□□□ -1.03
PCP4P48539 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC8.64□□□□□ -1.03
PCP4P48539 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC8.64□□□□□ -1.03
PCP4P48539 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 AC044849.2-201ENST00000606596 710 ntBASIC8.64□□□□□ -1.03
PCP4P48539 STAG3-219ENST00000620100 4203 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
PCP4P48539 POLR3A-205ENST00000616246 1668 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC8.64□□□□□ -1.03
PCP4P48539 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.64□□□□□ -1.03
PCP4P48539 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC8.64□□□□□ -1.03
PCP4P48539 CLN8-212ENST00000637083 2001 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
PCP4P48539 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 FBXL7-201ENST00000329673 3960 ntTSL 2 BASIC8.64□□□□□ -1.03
PCP4P48539 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
PCP4P48539 GPR50-201ENST00000218316 1951 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 HSPBAP1-201ENST00000306103 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 DNTT-201ENST00000371174 1972 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC8.64□□□□□ -1.03
PCP4P48539 KLK10-201ENST00000309958 3111 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 FGD3-203ENST00000416701 3432 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
PCP4P48539 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 ATP6V1H-203ENST00000396774 1892 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
PCP4P48539 TULP4-201ENST00000367094 5170 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 DAB1-206ENST00000414851 5168 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
PCP4P48539 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 AC025183.3-201ENST00000623526 1482 ntBASIC8.64□□□□□ -1.03
PCP4P48539 OLA1P3-201ENST00000550756 2555 ntBASIC8.64□□□□□ -1.03
PCP4P48539 SCMH1-203ENST00000361191 2906 ntTSL 5 BASIC8.64□□□□□ -1.03
PCP4P48539 GRM3-203ENST00000439827 1811 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
PCP4P48539 CATSPERG-204ENST00000410018 3626 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
PCP4P48539 MST1R-202ENST00000344206 4198 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
PCP4P48539 LINC01104-202ENST00000452354 3115 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 AC105053.1-201ENST00000366278 1711 ntTSL 2 BASIC8.63□□□□□ -1.03
PCP4P48539 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC8.63□□□□□ -1.03
PCP4P48539 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC8.63□□□□□ -1.03
PCP4P48539 TNS1-209ENST00000446688 4292 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
PCP4P48539 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
PCP4P48539 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC8.63□□□□□ -1.03
PCP4P48539 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
PCP4P48539 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC8.63□□□□□ -1.03
PCP4P48539 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC8.63□□□□□ -1.03
PCP4P48539 ABHD17AP3-201ENST00000503096 1137 ntBASIC8.63□□□□□ -1.03
PCP4P48539 AC060814.1-201ENST00000554326 538 ntBASIC8.63□□□□□ -1.03
PCP4P48539 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
PCP4P48539 ZNF548-209ENST00000598895 571 ntTSL 4 BASIC8.63□□□□□ -1.03
PCP4P48539 SNAP91-212ENST00000520302 4136 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 LCORL-207ENST00000635767 10430 ntTSL 5 BASIC8.63□□□□□ -1.03
PCP4P48539 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 LINC01443-202ENST00000584531 1854 ntTSL 2 BASIC8.63□□□□□ -1.03
PCP4P48539 SZRD1-202ENST00000401089 3447 ntTSL 2 BASIC8.63□□□□□ -1.03
PCP4P48539 NLRC5-201ENST00000262510 6822 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
PCP4P48539 TXNL4B-202ENST00000423037 2490 ntAPPRIS P1 TSL 4 BASIC8.63□□□□□ -1.03
PCP4P48539 SLC37A1-202ENST00000398341 3094 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 SPEF2-201ENST00000282469 3026 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 THNSL2-201ENST00000324166 3649 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
PCP4P48539 OGDHL-202ENST00000419399 3588 ntTSL 2 BASIC8.63□□□□□ -1.03
PCP4P48539 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 LETM2-207ENST00000523983 1776 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
PCP4P48539 CLUHP8-201ENST00000547527 1485 ntBASIC8.63□□□□□ -1.03
PCP4P48539 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
PCP4P48539 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.63□□□□□ -1.03
PCP4P48539 DMP1-201ENST00000282479 2634 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
PCP4P48539 DNMBP-AS1-202ENST00000434409 2034 ntTSL 2 BASIC8.63□□□□□ -1.03
PCP4P48539 IL7-210ENST00000541183 2020 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
PCP4P48539 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms