Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CTLA4P16410 ODCP-201ENST00000459650 1639 ntBASIC12.17□□□□□ -0.46
CTLA4P16410 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CTLA4P16410 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CTLA4P16410 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CTLA4P16410 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.17□□□□□ -0.46
CTLA4P16410 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.17□□□□□ -0.46
CTLA4P16410 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.17□□□□□ -0.46
CTLA4P16410 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.16□□□□□ -0.46
CTLA4P16410 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.16□□□□□ -0.46
CTLA4P16410 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.16□□□□□ -0.46
CTLA4P16410 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.16□□□□□ -0.46
CTLA4P16410 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CTLA4P16410 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CTLA4P16410 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.16□□□□□ -0.46
CTLA4P16410 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.16□□□□□ -0.46
CTLA4P16410 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CTLA4P16410 AL645937.6-201ENST00000641122 3727 ntBASIC12.16□□□□□ -0.46
CTLA4P16410 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 AC022364.1-202ENST00000617468 2409 ntBASIC12.16□□□□□ -0.46
CTLA4P16410 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.16□□□□□ -0.46
CTLA4P16410 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CTLA4P16410 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.16□□□□□ -0.46
CTLA4P16410 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.16□□□□□ -0.46
CTLA4P16410 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.16□□□□□ -0.46
CTLA4P16410 AC007274.1-201ENST00000439805 662 ntBASIC12.16□□□□□ -0.46
CTLA4P16410 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.16□□□□□ -0.46
CTLA4P16410 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
CTLA4P16410 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.16□□□□□ -0.46
CTLA4P16410 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.16□□□□□ -0.46
CTLA4P16410 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.16□□□□□ -0.46
CTLA4P16410 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.16□□□□□ -0.46
CTLA4P16410 AC244093.1-201ENST00000610837 814 ntBASIC12.16□□□□□ -0.46
CTLA4P16410 AF254983.2-201ENST00000612331 135 ntBASIC12.16□□□□□ -0.46
CTLA4P16410 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
CTLA4P16410 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.16□□□□□ -0.46
CTLA4P16410 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CTLA4P16410 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
CTLA4P16410 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
CTLA4P16410 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 RBM22P2-201ENST00000393978 1814 ntBASIC12.16□□□□□ -0.46
CTLA4P16410 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CTLA4P16410 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.16□□□□□ -0.46
CTLA4P16410 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
CTLA4P16410 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CTLA4P16410 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.15□□□□□ -0.46
CTLA4P16410 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.15□□□□□ -0.46
CTLA4P16410 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.15□□□□□ -0.46
CTLA4P16410 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
CTLA4P16410 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CTLA4P16410 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CTLA4P16410 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 TBC1D3J-201ENST00000620719 1426 ntBASIC12.15□□□□□ -0.46
CTLA4P16410 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.15□□□□□ -0.46
CTLA4P16410 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms