Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC12.51□□□□□ -0.41
P04436 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 KRT18P4-201ENST00000422599 1288 ntBASIC12.51□□□□□ -0.41
P04436 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC12.51□□□□□ -0.41
P04436 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.51□□□□□ -0.41
P04436 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC12.51□□□□□ -0.41
P04436 ASS1P2-201ENST00000439895 1223 ntBASIC12.51□□□□□ -0.41
P04436 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC12.51□□□□□ -0.41
P04436 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC12.51□□□□□ -0.41
P04436 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
P04436 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.51□□□□□ -0.41
P04436 PFN2-212ENST00000490975 858 ntTSL 4 BASIC12.51□□□□□ -0.41
P04436 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.51□□□□□ -0.41
P04436 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC12.51□□□□□ -0.41
P04436 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC12.51□□□□□ -0.41
P04436 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC12.51□□□□□ -0.41
P04436 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC12.51□□□□□ -0.41
P04436 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.51□□□□□ -0.41
P04436 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.51□□□□□ -0.41
P04436 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC12.51□□□□□ -0.41
P04436 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC12.51□□□□□ -0.41
P04436 HLA-C-210ENST00000640219 976 ntBASIC12.51□□□□□ -0.41
P04436 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 KRT8P42-201ENST00000405771 1399 ntBASIC12.51□□□□□ -0.41
P04436 FAM90A21P-201ENST00000510875 1396 ntBASIC12.51□□□□□ -0.41
P04436 FAM90A15P-201ENST00000514465 1395 ntBASIC12.51□□□□□ -0.41
P04436 FAM90A6P-201ENST00000515148 1394 ntBASIC12.51□□□□□ -0.41
P04436 FAM90A16P-201ENST00000526662 1395 ntBASIC12.51□□□□□ -0.41
P04436 FAM90A9P-201ENST00000527940 1395 ntBASIC12.51□□□□□ -0.41
P04436 FAM90A5P-201ENST00000528738 1395 ntBASIC12.51□□□□□ -0.41
P04436 FAM90A14P-201ENST00000530386 1395 ntBASIC12.51□□□□□ -0.41
P04436 FAM90A13P-201ENST00000534703 1395 ntBASIC12.51□□□□□ -0.41
P04436 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.51□□□□□ -0.41
P04436 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.51□□□□□ -0.41
P04436 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
P04436 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
P04436 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.51□□□□□ -0.41
P04436 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 AL731571.1-201ENST00000617058 5428 ntBASIC12.51□□□□□ -0.41
P04436 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.51□□□□□ -0.41
P04436 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.51□□□□□ -0.41
P04436 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
P04436 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
P04436 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.5□□□□□ -0.41
P04436 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.5□□□□□ -0.41
P04436 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
P04436 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
P04436 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
P04436 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.5□□□□□ -0.41
P04436 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
P04436 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.5□□□□□ -0.41
P04436 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
P04436 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.5□□□□□ -0.41
P04436 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 AL391647.1-201ENST00000395664 511 ntBASIC12.5□□□□□ -0.41
P04436 RPL10-203ENST00000406022 748 ntTSL 3 BASIC12.5□□□□□ -0.41
P04436 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC12.5□□□□□ -0.41
P04436 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC12.5□□□□□ -0.41
P04436 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC12.5□□□□□ -0.41
P04436 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC12.5□□□□□ -0.41
P04436 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC12.5□□□□□ -0.41
P04436 RN7SL582P-201ENST00000491078 279 ntBASIC12.5□□□□□ -0.41
P04436 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC12.5□□□□□ -0.41
P04436 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC12.5□□□□□ -0.41
P04436 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC12.5□□□□□ -0.41
P04436 SAA2-206ENST00000530400 323 ntTSL 3 BASIC12.5□□□□□ -0.41
P04436 GOLGA2P7-209ENST00000560408 745 ntBASIC12.5□□□□□ -0.41
P04436 AL136982.5-201ENST00000605222 294 ntBASIC12.5□□□□□ -0.41
P04436 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
P04436 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.5□□□□□ -0.41
P04436 ABCD1P2-201ENST00000429313 1601 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms