Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.29□□□□□ -0.44
CNOT4O95628 AC008620.2-201ENST00000510294 1569 ntBASIC12.29□□□□□ -0.44
CNOT4O95628 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CNOT4O95628 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CNOT4O95628 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CNOT4O95628 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CNOT4O95628 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CNOT4O95628 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CNOT4O95628 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.29□□□□□ -0.44
CNOT4O95628 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.29□□□□□ -0.44
CNOT4O95628 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CNOT4O95628 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CNOT4O95628 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CNOT4O95628 AL031432.4-201ENST00000641729 2190 ntBASIC12.29□□□□□ -0.44
CNOT4O95628 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CNOT4O95628 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CNOT4O95628 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CNOT4O95628 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CNOT4O95628 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CNOT4O95628 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CNOT4O95628 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CNOT4O95628 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CNOT4O95628 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CNOT4O95628 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.28□□□□□ -0.44
CNOT4O95628 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CNOT4O95628 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CNOT4O95628 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.28□□□□□ -0.44
CNOT4O95628 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.28□□□□□ -0.44
CNOT4O95628 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CNOT4O95628 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.28□□□□□ -0.44
CNOT4O95628 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.28□□□□□ -0.44
CNOT4O95628 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.28□□□□□ -0.44
CNOT4O95628 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.28□□□□□ -0.44
CNOT4O95628 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CNOT4O95628 RNVU1-8-201ENST00000364272 125 ntBASIC12.28□□□□□ -0.44
CNOT4O95628 HIST2H2BA-201ENST00000412169 381 ntBASIC12.28□□□□□ -0.44
CNOT4O95628 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.28□□□□□ -0.44
CNOT4O95628 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.28□□□□□ -0.44
CNOT4O95628 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.28□□□□□ -0.44
CNOT4O95628 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.28□□□□□ -0.44
CNOT4O95628 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CNOT4O95628 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 RN7SL564P-201ENST00000496309 250 ntBASIC12.28□□□□□ -0.44
CNOT4O95628 PRSS3P1-201ENST00000503996 742 ntBASIC12.28□□□□□ -0.44
CNOT4O95628 AC095040.1-201ENST00000513286 675 ntBASIC12.28□□□□□ -0.44
CNOT4O95628 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
CNOT4O95628 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
CNOT4O95628 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC12.28□□□□□ -0.44
CNOT4O95628 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.28□□□□□ -0.44
CNOT4O95628 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC12.28□□□□□ -0.44
CNOT4O95628 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.28□□□□□ -0.44
CNOT4O95628 AL049840.2-201ENST00000602722 535 ntBASIC12.28□□□□□ -0.44
CNOT4O95628 AC091769.1-201ENST00000619576 568 ntBASIC12.28□□□□□ -0.44
CNOT4O95628 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 LINC00538-201ENST00000626109 1906 ntBASIC12.28□□□□□ -0.44
CNOT4O95628 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.28□□□□□ -0.44
CNOT4O95628 AL157996.1-201ENST00000624684 2299 ntBASIC12.28□□□□□ -0.44
CNOT4O95628 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 MAPK10-262ENST00000641051 5738 ntBASIC12.28□□□□□ -0.44
CNOT4O95628 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 DGCR9-201ENST00000609630 2415 ntBASIC12.28□□□□□ -0.44
CNOT4O95628 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CNOT4O95628 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CNOT4O95628 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
CNOT4O95628 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CNOT4O95628 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CNOT4O95628 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.27□□□□□ -0.44
CNOT4O95628 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CNOT4O95628 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.27□□□□□ -0.44
CNOT4O95628 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CNOT4O95628 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CNOT4O95628 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.27□□□□□ -0.44
CNOT4O95628 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CNOT4O95628 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CNOT4O95628 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
CNOT4O95628 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.27□□□□□ -0.45
CNOT4O95628 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CNOT4O95628 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CNOT4O95628 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms