Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.62□□□□□ -0.07
O00370 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
O00370 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.62□□□□□ -0.07
O00370 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.62□□□□□ -0.07
O00370 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
O00370 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.62□□□□□ -0.07
O00370 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
O00370 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.62□□□□□ -0.07
O00370 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
O00370 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC14.62□□□□□ -0.07
O00370 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.62□□□□□ -0.07
O00370 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.62□□□□□ -0.07
O00370 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.62□□□□□ -0.07
O00370 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.62□□□□□ -0.07
O00370 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.62□□□□□ -0.07
O00370 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.62□□□□□ -0.07
O00370 RN7SKP155-201ENST00000516031 288 ntBASIC14.62□□□□□ -0.07
O00370 AP000911.2-201ENST00000534330 502 ntBASIC14.62□□□□□ -0.07
O00370 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
O00370 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.62□□□□□ -0.07
O00370 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC14.62□□□□□ -0.07
O00370 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.62□□□□□ -0.07
O00370 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.62□□□□□ -0.07
O00370 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
O00370 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
O00370 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
O00370 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
O00370 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
O00370 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.61□□□□□ -0.07
O00370 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
O00370 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 AC102953.2-201ENST00000609755 3026 ntBASIC14.61□□□□□ -0.07
O00370 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 ERG-211ENST00000453032 1595 ntTSL 2 BASIC14.61□□□□□ -0.07
O00370 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
O00370 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.61□□□□□ -0.07
O00370 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.61□□□□□ -0.07
O00370 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
O00370 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
O00370 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.61□□□□□ -0.07
O00370 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.61□□□□□ -0.07
O00370 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.61□□□□□ -0.07
O00370 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.61□□□□□ -0.07
O00370 FTLP1-201ENST00000449155 526 ntBASIC14.61□□□□□ -0.07
O00370 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.61□□□□□ -0.07
O00370 AC068867.1-201ENST00000559855 150 ntBASIC14.61□□□□□ -0.07
O00370 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.61□□□□□ -0.07
O00370 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.61□□□□□ -0.07
O00370 AC005041.3-201ENST00000606287 649 ntBASIC14.61□□□□□ -0.07
O00370 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.61□□□□□ -0.07
O00370 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
O00370 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.61□□□□□ -0.07
O00370 AC005618.3-201ENST00000624928 458 ntBASIC14.61□□□□□ -0.07
O00370 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.61□□□□□ -0.07
O00370 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
O00370 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
O00370 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.61□□□□□ -0.07
O00370 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
O00370 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
O00370 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms