Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 SNU13-204ENST00000402458 462 ntTSL 3 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 AC100858.1-201ENST00000514059 1228 ntBASIC12.07□□□□□ -0.48
NPIPB4C9JG80 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 AL450468.2-201ENST00000565955 1889 ntBASIC12.07□□□□□ -0.48
NPIPB4C9JG80 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 AC087392.5-201ENST00000612517 489 ntBASIC12.07□□□□□ -0.48
NPIPB4C9JG80 AC084781.1-201ENST00000613737 656 ntBASIC12.07□□□□□ -0.48
NPIPB4C9JG80 C2orf27AP1-201ENST00000618128 586 ntBASIC12.07□□□□□ -0.48
NPIPB4C9JG80 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 AC091807.1-201ENST00000418838 1544 ntBASIC12.06□□□□□ -0.48
NPIPB4C9JG80 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 SERF2-204ENST00000402131 586 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 RN7SL769P-201ENST00000469386 295 ntBASIC12.06□□□□□ -0.48
NPIPB4C9JG80 FAM213AP2-201ENST00000521579 683 ntBASIC12.06□□□□□ -0.48
NPIPB4C9JG80 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 AP000322.3-201ENST00000608665 388 ntBASIC12.06□□□□□ -0.48
NPIPB4C9JG80 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 LINC00244-201ENST00000625073 613 ntBASIC12.06□□□□□ -0.48
NPIPB4C9JG80 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
NPIPB4C9JG80 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms