Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 SLC14A1-203ENST00000415427 1554 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 MTCYBP7-201ENST00000419540 1134 ntBASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 BMS1P12-201ENST00000428213 706 ntBASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 CETN4P-201ENST00000432407 469 ntBASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 ATP6V1D-209ENST00000555431 1085 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 MIR4754-201ENST00000582477 89 ntBASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 AL133467.4-201ENST00000602953 725 ntBASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 AC009974.1-201ENST00000608881 455 ntBASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 AL391834.2-201ENST00000609982 546 ntBASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 FAM90A2P-201ENST00000511144 1395 ntBASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 FAM90A25P-201ENST00000528404 1395 ntBASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 AL591122.2-201ENST00000624125 1853 ntBASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 AL133466.1-201ENST00000447582 150 ntBASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 RNU6-551P-201ENST00000516661 103 ntBASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 OR8X1P-201ENST00000534542 869 ntBASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 LINC01490-201ENST00000548705 638 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 AC068790.2-201ENST00000602601 557 ntBASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 AC242628.1-201ENST00000606810 391 ntBASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 AL353770.1-201ENST00000614915 403 ntBASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 AC026585.1-201ENST00000619582 524 ntBASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 CU633904.3-201ENST00000624042 1029 ntBASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 AC138627.1-207ENST00000641560 1006 ntBASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 MARK2P9-201ENST00000430958 1727 ntBASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 MARK2P16-201ENST00000605714 1723 ntBASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PCDHB13Q9Y5F0 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms