Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.28□□□□□ -0.44
LRRC28Q86X40 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 AC022497.1-201ENST00000624916 3691 ntBASIC12.28□□□□□ -0.44
LRRC28Q86X40 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.28□□□□□ -0.44
LRRC28Q86X40 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 AC090164.2-201ENST00000611487 516 ntBASIC12.28□□□□□ -0.44
LRRC28Q86X40 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC12.28□□□□□ -0.44
LRRC28Q86X40 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12.27□□□□□ -0.44
LRRC28Q86X40 REXO1L1P-201ENST00000379010 6598 ntBASIC12.27□□□□□ -0.44
LRRC28Q86X40 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
LRRC28Q86X40 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LRRC28Q86X40 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LRRC28Q86X40 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LRRC28Q86X40 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LRRC28Q86X40 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LRRC28Q86X40 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LRRC28Q86X40 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LRRC28Q86X40 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LRRC28Q86X40 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
LRRC28Q86X40 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 SSR4P1-201ENST00000415143 412 ntBASIC12.27□□□□□ -0.45
LRRC28Q86X40 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 AC016700.1-201ENST00000429424 312 ntBASIC12.27□□□□□ -0.45
LRRC28Q86X40 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms