Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ATAT1-204ENST00000330083 1728 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDC42BPAQ5VT25 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDC42BPAQ5VT25 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDC42BPAQ5VT25 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 AC004884.1-201ENST00000393647 319 ntBASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 AL357054.1-201ENST00000407035 1227 ntBASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 AL365194.1-201ENST00000440032 361 ntTSL 3 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 RN7SL483P-201ENST00000478417 285 ntBASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 IGHV1OR16-3-201ENST00000568138 205 ntBASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 AC007608.2-201ENST00000569940 1146 ntTSL 3 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 KRT18P45-201ENST00000515347 1333 ntBASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 M1AP-201ENST00000290536 2543 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 DDX6P2-201ENST00000619520 1455 ntBASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 AC034238.1-214ENST00000609699 1590 ntTSL 5 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 SPTLC1P3-201ENST00000403408 259 ntBASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 FTLP3-201ENST00000427242 528 ntBASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 AC002451.1-202ENST00000432265 771 ntTSL 2 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 RN7SL69P-201ENST00000468423 272 ntBASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 PSMD6-209ENST00000482510 1176 ntTSL 5 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 FOS-205ENST00000555242 629 ntTSL 2 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 MIR378I-201ENST00000582688 76 ntBASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 RN7SL750P-201ENST00000582814 238 ntBASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 CALM3-206ENST00000594523 540 ntTSL 4 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 Metazoa_SRP.198-201ENST00000610617 323 ntBASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC19.82■□□□□ 0.76
CDC42BPAQ5VT25 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 PCDHB19P-202ENST00000625133 2914 ntBASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 AC091941.1-201ENST00000623003 576 ntBASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42BPAQ5VT25 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 APTX-203ENST00000379813 1121 ntTSL 5 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 UCMA-202ENST00000463405 763 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 SLIRP-209ENST00000557342 408 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 SLIRP-211ENST00000557623 865 ntTSL 2 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 AC007450.4-201ENST00000614709 524 ntBASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 AC021683.4-201ENST00000623348 1099 ntBASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 AC099689.1-201ENST00000624383 1302 ntBASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 AC109326.1-201ENST00000624705 1321 ntBASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms