Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 NHP2P1-201ENST00000335274 462 ntBASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 UROS-201ENST00000368774 744 ntTSL 2 BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 PRR20FP-201ENST00000603320 180 ntBASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 AC006986.1-201ENST00000612764 241 ntBASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 MFSD12-215ENST00000615613 688 ntBASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 MYO15B-237ENST00000642007 4893 ntBASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHROOM1Q2M3G4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 AL137244.1-201ENST00000422931 865 ntBASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 IGHVII-74-1-201ENST00000517572 241 ntBASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 KRT18P8-201ENST00000581937 1246 ntBASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 AC009041.4-201ENST00000620075 638 ntBASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 FTO-214ENST00000636218 2227 ntTSL 5 BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 AL157832.2-205ENST00000597245 1649 ntBASIC15.76■□□□□ 0.11
SHROOM1Q2M3G4 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 KRT18P44-201ENST00000416086 1285 ntBASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 AC023141.7-201ENST00000430646 407 ntBASIC15.75■□□□□ 0.11
SHROOM1Q2M3G4 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms