Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 BEND3P3-201ENST00000611030 2440 ntBASIC14.65□□□□□ -0.06
BRCA2P51587 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 AC073578.1-201ENST00000535133 493 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 RN7SL733P-201ENST00000582253 329 ntBASIC14.64□□□□□ -0.07
BRCA2P51587 RN7SL248P-201ENST00000615117 329 ntBASIC14.64□□□□□ -0.07
BRCA2P51587 RN7SL453P-201ENST00000620275 329 ntBASIC14.64□□□□□ -0.07
BRCA2P51587 TEAD1-207ENST00000638666 1281 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
BRCA2P51587 DDX6P2-201ENST00000619520 1455 ntBASIC14.64□□□□□ -0.07
BRCA2P51587 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
BRCA2P51587 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
BRCA2P51587 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 AIRN-201ENST00000601203 4374 ntBASIC14.64□□□□□ -0.07
BRCA2P51587 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.64□□□□□ -0.07
BRCA2P51587 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
BRCA2P51587 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
BRCA2P51587 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
BRCA2P51587 LYPD4-201ENST00000343055 1051 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 GSTA4-201ENST00000370959 793 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
BRCA2P51587 SYP-AS1-201ENST00000433499 542 ntTSL 2 BASIC14.64□□□□□ -0.07
BRCA2P51587 AC074366.1-204ENST00000446277 552 ntTSL 3 BASIC14.64□□□□□ -0.07
BRCA2P51587 AC023157.1-201ENST00000453713 402 ntBASIC14.64□□□□□ -0.07
BRCA2P51587 AC106748.1-201ENST00000454801 384 ntBASIC14.64□□□□□ -0.07
BRCA2P51587 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 LYPD4-202ENST00000601246 1076 ntTSL 5 BASIC14.64□□□□□ -0.07
BRCA2P51587 AL355353.1-201ENST00000604014 330 ntBASIC14.64□□□□□ -0.07
BRCA2P51587 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC14.64□□□□□ -0.07
BRCA2P51587 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
BRCA2P51587 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.64□□□□□ -0.07
BRCA2P51587 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC14.64□□□□□ -0.07
BRCA2P51587 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.64□□□□□ -0.07
BRCA2P51587 AL513497.1-201ENST00000624273 2083 ntBASIC14.64□□□□□ -0.07
BRCA2P51587 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
BRCA2P51587 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
BRCA2P51587 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 RPL15-202ENST00000354811 820 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 TXNDC9-205ENST00000434323 733 ntTSL 5 BASIC14.64□□□□□ -0.07
BRCA2P51587 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC14.64□□□□□ -0.07
BRCA2P51587 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC14.64□□□□□ -0.07
BRCA2P51587 KRT16P1-202ENST00000577750 679 ntTSL 3 BASIC14.64□□□□□ -0.07
BRCA2P51587 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 AC007191.1-201ENST00000623179 2995 ntBASIC14.64□□□□□ -0.07
BRCA2P51587 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 TCAF1P1-201ENST00000414990 2232 ntBASIC14.64□□□□□ -0.07
BRCA2P51587 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRCA2P51587 SCARB2-202ENST00000452464 1495 ntTSL 2 BASIC14.63□□□□□ -0.07
BRCA2P51587 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRCA2P51587 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
BRCA2P51587 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.63□□□□□ -0.07
BRCA2P51587 MAGEA9B-203ENST00000595065 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRCA2P51587 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.63□□□□□ -0.07
BRCA2P51587 AC005840.4-201ENST00000541242 2494 ntBASIC14.63□□□□□ -0.07
BRCA2P51587 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC14.63□□□□□ -0.07
BRCA2P51587 CDCA4P3-201ENST00000442572 689 ntBASIC14.63□□□□□ -0.07
BRCA2P51587 AC110753.1-201ENST00000505711 1022 ntBASIC14.63□□□□□ -0.07
BRCA2P51587 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BRCA2P51587 FXYD3-207ENST00000604255 780 ntTSL 5 BASIC14.63□□□□□ -0.07
BRCA2P51587 C2orf27AP1-201ENST00000618128 586 ntBASIC14.63□□□□□ -0.07
BRCA2P51587 AL160408.6-201ENST00000632063 1257 ntTSL 5 BASIC14.63□□□□□ -0.07
BRCA2P51587 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC14.63□□□□□ -0.07
BRCA2P51587 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC14.63□□□□□ -0.07
BRCA2P51587 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
BRCA2P51587 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRCA2P51587 MEG8-220ENST00000636052 1369 ntTSL 5 BASIC14.63□□□□□ -0.07
BRCA2P51587 CABYR-203ENST00000399496 1414 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRCA2P51587 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BRCA2P51587 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BRCA2P51587 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BRCA2P51587 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC14.63□□□□□ -0.07
BRCA2P51587 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRCA2P51587 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRCA2P51587 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRCA2P51587 EXOC7-206ENST00000406660 718 ntTSL 2 BASIC14.63□□□□□ -0.07
BRCA2P51587 AL390061.1-201ENST00000457804 293 ntTSL 2 BASIC14.63□□□□□ -0.07
BRCA2P51587 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC14.63□□□□□ -0.07
BRCA2P51587 MPI-212ENST00000565576 1148 ntTSL 2 BASIC14.63□□□□□ -0.07
BRCA2P51587 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
BRCA2P51587 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRCA2P51587 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC14.63□□□□□ -0.07
BRCA2P51587 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
BRCA2P51587 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRCA2P51587 ZDHHC8P1-202ENST00000418264 1403 ntBASIC14.63□□□□□ -0.07
BRCA2P51587 AC025538.1-201ENST00000510707 1486 ntBASIC14.63□□□□□ -0.07
BRCA2P51587 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.63□□□□□ -0.07
BRCA2P51587 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRCA2P51587 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.63□□□□□ -0.07
BRCA2P51587 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms