Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF9P41273 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF9P41273 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF9P41273 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TNFSF9P41273 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF9P41273 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC14.74□□□□□ -0.05
TNFSF9P41273 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFSF9P41273 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 GUCY2EP-203ENST00000531117 1918 ntBASIC14.74□□□□□ -0.05
TNFSF9P41273 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 AC020658.7-201ENST00000624274 2442 ntBASIC14.74□□□□□ -0.05
TNFSF9P41273 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
TNFSF9P41273 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TNFSF9P41273 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.74□□□□□ -0.05
TNFSF9P41273 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TNFSF9P41273 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFSF9P41273 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TNFSF9P41273 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TNFSF9P41273 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFSF9P41273 AC092903.1-201ENST00000466506 262 ntBASIC14.74□□□□□ -0.05
TNFSF9P41273 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.74□□□□□ -0.05
TNFSF9P41273 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFSF9P41273 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.74□□□□□ -0.05
TNFSF9P41273 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFSF9P41273 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC14.74□□□□□ -0.05
TNFSF9P41273 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.74□□□□□ -0.05
TNFSF9P41273 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TNFSF9P41273 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.74□□□□□ -0.05
TNFSF9P41273 CSTP2-201ENST00000610599 398 ntBASIC14.74□□□□□ -0.05
TNFSF9P41273 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TNFSF9P41273 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
TNFSF9P41273 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
TNFSF9P41273 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.74□□□□□ -0.05
TNFSF9P41273 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC14.74□□□□□ -0.05
TNFSF9P41273 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.74□□□□□ -0.05
TNFSF9P41273 AL355102.3-201ENST00000554299 1678 ntBASIC14.74□□□□□ -0.05
TNFSF9P41273 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFSF9P41273 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFSF9P41273 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF9P41273 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TNFSF9P41273 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC14.73□□□□□ -0.05
TNFSF9P41273 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF9P41273 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
TNFSF9P41273 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF9P41273 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF9P41273 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFSF9P41273 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFSF9P41273 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF9P41273 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TNFSF9P41273 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC14.73□□□□□ -0.05
TNFSF9P41273 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF9P41273 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.73□□□□□ -0.05
TNFSF9P41273 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF9P41273 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF9P41273 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF9P41273 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFSF9P41273 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TNFSF9P41273 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFSF9P41273 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC14.73□□□□□ -0.05
TNFSF9P41273 NALT1-202ENST00000450304 437 ntTSL 3 BASIC14.73□□□□□ -0.05
TNFSF9P41273 RN7SL582P-201ENST00000491078 279 ntBASIC14.73□□□□□ -0.05
TNFSF9P41273 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF9P41273 AC090136.2-201ENST00000517809 420 ntBASIC14.73□□□□□ -0.05
TNFSF9P41273 GOLGA2P7-209ENST00000560408 745 ntBASIC14.73□□□□□ -0.05
TNFSF9P41273 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.73□□□□□ -0.05
TNFSF9P41273 AC073869.4-201ENST00000620841 800 ntBASIC14.73□□□□□ -0.05
TNFSF9P41273 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
TNFSF9P41273 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF9P41273 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
TNFSF9P41273 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFSF9P41273 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC14.73□□□□□ -0.05
TNFSF9P41273 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF9P41273 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF9P41273 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TNFSF9P41273 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF9P41273 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TNFSF9P41273 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
TNFSF9P41273 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF9P41273 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.73□□□□□ -0.05
TNFSF9P41273 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TNFSF9P41273 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms