Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC16.65■□□□□ 0.26
PDE6BP35913 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PDE6BP35913 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.65■□□□□ 0.26
PDE6BP35913 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PDE6BP35913 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 OR7E122P-201ENST00000383606 1017 ntBASIC16.65■□□□□ 0.26
PDE6BP35913 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC16.65■□□□□ 0.26
PDE6BP35913 CA5BP1-205ENST00000435806 1064 ntBASIC16.65■□□□□ 0.26
PDE6BP35913 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC16.65■□□□□ 0.26
PDE6BP35913 TULP3P1-202ENST00000453253 1291 ntBASIC16.65■□□□□ 0.26
PDE6BP35913 RN7SL22P-201ENST00000471800 269 ntBASIC16.65■□□□□ 0.26
PDE6BP35913 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PDE6BP35913 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC16.65■□□□□ 0.26
PDE6BP35913 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.65■□□□□ 0.26
PDE6BP35913 CICP16-201ENST00000502609 2813 ntBASIC16.65■□□□□ 0.26
PDE6BP35913 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PDE6BP35913 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC16.65■□□□□ 0.26
PDE6BP35913 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 AL928654.5-201ENST00000624831 2501 ntBASIC16.65■□□□□ 0.26
PDE6BP35913 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.65■□□□□ 0.26
PDE6BP35913 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.65■□□□□ 0.26
PDE6BP35913 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC16.65■□□□□ 0.26
PDE6BP35913 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC16.65■□□□□ 0.26
PDE6BP35913 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6BP35913 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PDE6BP35913 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
PDE6BP35913 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
PDE6BP35913 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
PDE6BP35913 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.64■□□□□ 0.26
PDE6BP35913 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.64■□□□□ 0.25
PDE6BP35913 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6BP35913 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PDE6BP35913 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PDE6BP35913 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC16.64■□□□□ 0.25
PDE6BP35913 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.64■□□□□ 0.25
PDE6BP35913 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.64■□□□□ 0.25
PDE6BP35913 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6BP35913 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PDE6BP35913 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6BP35913 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6BP35913 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6BP35913 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PDE6BP35913 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC16.64■□□□□ 0.25
PDE6BP35913 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.64■□□□□ 0.25
PDE6BP35913 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PDE6BP35913 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6BP35913 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6BP35913 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC16.64■□□□□ 0.25
PDE6BP35913 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC16.64■□□□□ 0.25
PDE6BP35913 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6BP35913 ALDOAP1-201ENST00000491506 1078 ntBASIC16.64■□□□□ 0.25
PDE6BP35913 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC16.64■□□□□ 0.25
PDE6BP35913 AC063924.1-201ENST00000546680 673 ntBASIC16.64■□□□□ 0.25
PDE6BP35913 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC16.64■□□□□ 0.25
PDE6BP35913 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC16.64■□□□□ 0.25
PDE6BP35913 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC16.64■□□□□ 0.25
PDE6BP35913 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PDE6BP35913 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.64■□□□□ 0.25
PDE6BP35913 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6BP35913 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6BP35913 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
PDE6BP35913 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6BP35913 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6BP35913 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6BP35913 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PDE6BP35913 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6BP35913 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC16.64■□□□□ 0.25
PDE6BP35913 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6BP35913 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.63■□□□□ 0.25
PDE6BP35913 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDE6BP35913 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDE6BP35913 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDE6BP35913 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC16.63■□□□□ 0.25
PDE6BP35913 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDE6BP35913 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PDE6BP35913 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDE6BP35913 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDE6BP35913 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDE6BP35913 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC16.63■□□□□ 0.25
PDE6BP35913 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC16.63■□□□□ 0.25
PDE6BP35913 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC16.63■□□□□ 0.25
PDE6BP35913 MKL1-204ENST00000402630 747 ntTSL 2 BASIC16.63■□□□□ 0.25
PDE6BP35913 TUBB8P9-201ENST00000422534 1276 ntBASIC16.63■□□□□ 0.25
PDE6BP35913 TUBB8P10-201ENST00000430210 1279 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms