Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
CD40P25942 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CD40P25942 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.8□□□□□ -0.52
CD40P25942 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CD40P25942 ERG-211ENST00000453032 1595 ntTSL 2 BASIC11.8□□□□□ -0.52
CD40P25942 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC11.8□□□□□ -0.52
CD40P25942 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CD40P25942 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC11.8□□□□□ -0.52
CD40P25942 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC11.8□□□□□ -0.52
CD40P25942 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CD40P25942 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CD40P25942 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CD40P25942 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.8□□□□□ -0.52
CD40P25942 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CD40P25942 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC11.8□□□□□ -0.52
CD40P25942 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC11.8□□□□□ -0.52
CD40P25942 AC103563.1-201ENST00000429316 123 ntBASIC11.8□□□□□ -0.52
CD40P25942 AL512599.1-201ENST00000430724 685 ntBASIC11.8□□□□□ -0.52
CD40P25942 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC11.8□□□□□ -0.52
CD40P25942 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC11.8□□□□□ -0.52
CD40P25942 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC11.8□□□□□ -0.52
CD40P25942 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC11.8□□□□□ -0.52
CD40P25942 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CD40P25942 AC092903.1-201ENST00000466506 262 ntBASIC11.8□□□□□ -0.52
CD40P25942 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 SAA2-206ENST00000530400 323 ntTSL 3 BASIC11.8□□□□□ -0.52
CD40P25942 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC11.8□□□□□ -0.52
CD40P25942 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC11.8□□□□□ -0.52
CD40P25942 AC141586.1-203ENST00000567242 366 ntBASIC11.8□□□□□ -0.52
CD40P25942 AC010632.2-201ENST00000588369 1224 ntBASIC11.8□□□□□ -0.52
CD40P25942 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC11.8□□□□□ -0.52
CD40P25942 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC11.8□□□□□ -0.52
CD40P25942 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CD40P25942 AL160191.2-201ENST00000603975 601 ntBASIC11.8□□□□□ -0.52
CD40P25942 AC126755.5-201ENST00000622756 267 ntBASIC11.8□□□□□ -0.52
CD40P25942 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.8□□□□□ -0.52
CD40P25942 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.8□□□□□ -0.52
CD40P25942 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC11.8□□□□□ -0.52
CD40P25942 AC024075.2-201ENST00000598112 1473 ntBASIC11.8□□□□□ -0.52
CD40P25942 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.8□□□□□ -0.52
CD40P25942 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC11.8□□□□□ -0.52
CD40P25942 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.8□□□□□ -0.52
CD40P25942 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
CD40P25942 MARK2P9-201ENST00000430958 1727 ntBASIC11.8□□□□□ -0.52
CD40P25942 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CD40P25942 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD40P25942 AL358781.1-202ENST00000321081 1360 ntBASIC11.79□□□□□ -0.52
CD40P25942 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC11.79□□□□□ -0.52
CD40P25942 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
CD40P25942 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CD40P25942 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.79□□□□□ -0.52
CD40P25942 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CD40P25942 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.79□□□□□ -0.52
CD40P25942 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC11.79□□□□□ -0.52
CD40P25942 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC11.79□□□□□ -0.52
CD40P25942 MIR1301-201ENST00000408518 82 ntBASIC11.79□□□□□ -0.52
CD40P25942 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 OR51A9P-201ENST00000422578 911 ntBASIC11.79□□□□□ -0.52
CD40P25942 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms