Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 TUBB2BP1-201ENST00000404155 871 ntBASIC10.65□□□□□ -0.7
CXCL1P09341 RN7SKP175-201ENST00000408472 289 ntBASIC10.65□□□□□ -0.7
CXCL1P09341 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC10.65□□□□□ -0.7
CXCL1P09341 REEP4-207ENST00000523293 913 ntTSL 3 BASIC10.65□□□□□ -0.7
CXCL1P09341 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC10.65□□□□□ -0.7
CXCL1P09341 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC10.65□□□□□ -0.7
CXCL1P09341 ACLY-204ENST00000537919 2974 ntTSL 2 BASIC10.65□□□□□ -0.7
CXCL1P09341 AC092552.1-201ENST00000547243 906 ntBASIC10.65□□□□□ -0.7
CXCL1P09341 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CXCL1P09341 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC10.65□□□□□ -0.7
CXCL1P09341 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC10.65□□□□□ -0.7
CXCL1P09341 CYP4F3-206ENST00000591058 2983 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CXCL1P09341 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC10.65□□□□□ -0.7
CXCL1P09341 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC10.65□□□□□ -0.7
CXCL1P09341 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CXCL1P09341 AC002472.3-201ENST00000640124 621 ntBASIC10.65□□□□□ -0.7
CXCL1P09341 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
CXCL1P09341 BANK1-201ENST00000322953 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CXCL1P09341 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC10.65□□□□□ -0.7
CXCL1P09341 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
CXCL1P09341 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CXCL1P09341 DDB2-201ENST00000256996 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CXCL1P09341 SEPT10-201ENST00000356688 3091 ntTSL 2 BASIC10.65□□□□□ -0.7
CXCL1P09341 PLEKHG5-208ENST00000400915 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
CXCL1P09341 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
CXCL1P09341 PKD2L1-201ENST00000318222 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CXCL1P09341 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CXCL1P09341 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
CXCL1P09341 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CXCL1P09341 TAF5L-204ENST00000366676 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CXCL1P09341 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CXCL1P09341 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC10.65□□□□□ -0.71
CXCL1P09341 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CXCL1P09341 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CXCL1P09341 SLC7A15P-201ENST00000424028 1363 ntBASIC10.65□□□□□ -0.71
CXCL1P09341 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
CXCL1P09341 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 SMAP1-203ENST00000370455 3333 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
CXCL1P09341 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC10.64□□□□□ -0.71
CXCL1P09341 SYBU-222ENST00000529175 2717 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 LINC01134-203ENST00000442673 3059 ntTSL 2 BASIC10.64□□□□□ -0.71
CXCL1P09341 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC10.64□□□□□ -0.71
CXCL1P09341 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
CXCL1P09341 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC10.64□□□□□ -0.71
CXCL1P09341 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 HIRIP3-201ENST00000279392 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 ZNF542P-207ENST00000495307 3393 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 PPARD-205ENST00000448077 3516 ntTSL 2 BASIC10.64□□□□□ -0.71
CXCL1P09341 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 INTS9-201ENST00000416984 2759 ntTSL 2 BASIC10.64□□□□□ -0.71
CXCL1P09341 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC10.64□□□□□ -0.71
CXCL1P09341 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC10.64□□□□□ -0.71
CXCL1P09341 CAPN10-AS1-201ENST00000567819 4000 ntBASIC10.64□□□□□ -0.71
CXCL1P09341 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 XPC-201ENST00000285021 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 SPDYE19P-201ENST00000338590 713 ntBASIC10.64□□□□□ -0.71
CXCL1P09341 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 SLC4A5-204ENST00000377634 3814 ntAPPRIS P4 TSL 5 BASIC10.64□□□□□ -0.71
CXCL1P09341 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC10.64□□□□□ -0.71
CXCL1P09341 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC10.64□□□□□ -0.71
CXCL1P09341 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
CXCL1P09341 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC10.64□□□□□ -0.71
CXCL1P09341 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
CXCL1P09341 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
CXCL1P09341 AC004790.1-201ENST00000612686 536 ntBASIC10.64□□□□□ -0.71
CXCL1P09341 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC10.64□□□□□ -0.71
CXCL1P09341 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC10.64□□□□□ -0.71
CXCL1P09341 ENPP7P14-201ENST00000621765 1040 ntBASIC10.64□□□□□ -0.71
CXCL1P09341 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC10.64□□□□□ -0.71
CXCL1P09341 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC10.64□□□□□ -0.71
CXCL1P09341 CYP1A2-201ENST00000343932 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
CXCL1P09341 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC10.64□□□□□ -0.71
CXCL1P09341 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 AC005865.1-201ENST00000432994 3004 ntTSL 2 BASIC10.64□□□□□ -0.71
CXCL1P09341 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 GDA-203ENST00000376986 1771 ntTSL 2 BASIC10.64□□□□□ -0.71
CXCL1P09341 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC10.64□□□□□ -0.71
CXCL1P09341 CYP1A1-209ENST00000612821 2402 ntTSL 5 BASIC10.64□□□□□ -0.71
CXCL1P09341 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC10.64□□□□□ -0.71
CXCL1P09341 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CXCL1P09341 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC10.64□□□□□ -0.71
CXCL1P09341 RAET1K-202ENST00000533735 1883 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 SEC24A-201ENST00000322887 2700 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CXCL1P09341 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 271.3 ms