Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC019193.1-201ENST00000506678 823 ntBASIC12.09□□□□□ -0.47
NPIPB4C9JG80 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 PIGCP1-201ENST00000527583 895 ntBASIC12.09□□□□□ -0.47
NPIPB4C9JG80 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 HERC2P11-201ENST00000562845 725 ntBASIC12.09□□□□□ -0.47
NPIPB4C9JG80 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 AC100756.2-201ENST00000569537 736 ntBASIC12.09□□□□□ -0.47
NPIPB4C9JG80 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 AP001462.1-201ENST00000594089 452 ntBASIC12.09□□□□□ -0.47
NPIPB4C9JG80 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 AL445209.1-201ENST00000607269 3491 ntBASIC12.09□□□□□ -0.47
NPIPB4C9JG80 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 AC022364.1-202ENST00000617468 2409 ntBASIC12.09□□□□□ -0.47
NPIPB4C9JG80 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 PTN-202ENST00000393083 1599 ntTSL 5 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NPIPB4C9JG80 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
NPIPB4C9JG80 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
NPIPB4C9JG80 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
NPIPB4C9JG80 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
NPIPB4C9JG80 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
NPIPB4C9JG80 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
NPIPB4C9JG80 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 EGLN3-205ENST00000547327 2849 ntBASIC12.08□□□□□ -0.48
NPIPB4C9JG80 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 AC104590.1-202ENST00000558368 1921 ntBASIC12.08□□□□□ -0.48
NPIPB4C9JG80 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.08□□□□□ -0.48
NPIPB4C9JG80 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 AC006529.1-201ENST00000459978 637 ntBASIC12.08□□□□□ -0.48
NPIPB4C9JG80 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 RN7SL375P-201ENST00000492442 298 ntBASIC12.08□□□□□ -0.48
NPIPB4C9JG80 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 IGLV3-15-201ENST00000518356 244 ntBASIC12.08□□□□□ -0.48
NPIPB4C9JG80 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 AC026304.1-201ENST00000597953 561 ntBASIC12.08□□□□□ -0.48
NPIPB4C9JG80 AC140113.1-201ENST00000603467 169 ntBASIC12.08□□□□□ -0.48
NPIPB4C9JG80 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.08□□□□□ -0.48
NPIPB4C9JG80 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 AL031587.5-201ENST00000624344 1849 ntBASIC12.08□□□□□ -0.48
NPIPB4C9JG80 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 CA6-205ENST00000480186 1493 ntTSL 2 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
NPIPB4C9JG80 AC006144.1-201ENST00000424220 1600 ntBASIC12.08□□□□□ -0.48
NPIPB4C9JG80 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPB4C9JG80 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms