Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 KLF2P1-201ENST00000447438 1042 ntBASIC12.3□□□□□ -0.44
LRRC28Q86X40 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 AC104073.2-201ENST00000453737 312 ntBASIC12.3□□□□□ -0.44
LRRC28Q86X40 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 RPL18P13-201ENST00000478088 569 ntBASIC12.3□□□□□ -0.44
LRRC28Q86X40 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LRRC28Q86X40 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LRRC28Q86X40 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 AP000346.4-201ENST00000614827 381 ntBASIC12.3□□□□□ -0.44
LRRC28Q86X40 AC068587.8-201ENST00000641239 219 ntBASIC12.3□□□□□ -0.44
LRRC28Q86X40 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
LRRC28Q86X40 MARK2P16-201ENST00000605714 1723 ntBASIC12.3□□□□□ -0.44
LRRC28Q86X40 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LRRC28Q86X40 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LRRC28Q86X40 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LRRC28Q86X40 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LRRC28Q86X40 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.3□□□□□ -0.44
LRRC28Q86X40 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LRRC28Q86X40 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LRRC28Q86X40 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 AL590824.1-201ENST00000403828 1349 ntBASIC12.3□□□□□ -0.44
LRRC28Q86X40 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LRRC28Q86X40 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LRRC28Q86X40 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LRRC28Q86X40 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LRRC28Q86X40 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
LRRC28Q86X40 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 AL031432.4-201ENST00000641729 2190 ntBASIC12.29□□□□□ -0.44
LRRC28Q86X40 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 AL133338.1-201ENST00000565695 1517 ntBASIC12.29□□□□□ -0.44
LRRC28Q86X40 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 AL008707.1-201ENST00000422498 534 ntBASIC12.29□□□□□ -0.44
LRRC28Q86X40 CALR4P-201ENST00000431943 946 ntBASIC12.29□□□□□ -0.44
LRRC28Q86X40 AL157407.1-201ENST00000435784 904 ntBASIC12.29□□□□□ -0.44
LRRC28Q86X40 EIF4HP1-201ENST00000453115 687 ntBASIC12.29□□□□□ -0.44
LRRC28Q86X40 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 AL512310.5-201ENST00000551999 515 ntBASIC12.29□□□□□ -0.44
LRRC28Q86X40 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.29□□□□□ -0.44
LRRC28Q86X40 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 AC138649.2-201ENST00000615886 705 ntBASIC12.29□□□□□ -0.44
LRRC28Q86X40 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.29□□□□□ -0.44
LRRC28Q86X40 Z98259.2-201ENST00000641583 609 ntBASIC12.29□□□□□ -0.44
LRRC28Q86X40 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC12.29□□□□□ -0.44
LRRC28Q86X40 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LRRC28Q86X40 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LRRC28Q86X40 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms