Protein–RNA interactions for Protein: P57073

SOX8, Transcription factor SOX-8, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX8P57073 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SOX8P57073 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SOX8P57073 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SOX8P57073 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SOX8P57073 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
SOX8P57073 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.52□□□□□ -0.41
SOX8P57073 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SOX8P57073 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SOX8P57073 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC12.52□□□□□ -0.41
SOX8P57073 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SOX8P57073 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC12.52□□□□□ -0.41
SOX8P57073 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC12.52□□□□□ -0.41
SOX8P57073 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC12.52□□□□□ -0.41
SOX8P57073 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC12.52□□□□□ -0.41
SOX8P57073 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC12.52□□□□□ -0.41
SOX8P57073 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC12.52□□□□□ -0.41
SOX8P57073 HIST1H2APS2-201ENST00000454426 370 ntBASIC12.52□□□□□ -0.41
SOX8P57073 HNRNPA3P6-201ENST00000472163 1006 ntBASIC12.52□□□□□ -0.41
SOX8P57073 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC12.52□□□□□ -0.41
SOX8P57073 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC12.52□□□□□ -0.41
SOX8P57073 AC079414.2-201ENST00000567157 1104 ntBASIC12.52□□□□□ -0.41
SOX8P57073 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SOX8P57073 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SOX8P57073 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC12.52□□□□□ -0.41
SOX8P57073 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC12.52□□□□□ -0.41
SOX8P57073 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.52□□□□□ -0.41
SOX8P57073 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC12.52□□□□□ -0.41
SOX8P57073 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC12.52□□□□□ -0.41
SOX8P57073 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.52□□□□□ -0.41
SOX8P57073 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SOX8P57073 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SOX8P57073 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SOX8P57073 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC12.52□□□□□ -0.41
SOX8P57073 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SOX8P57073 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SOX8P57073 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SOX8P57073 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SOX8P57073 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SOX8P57073 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SOX8P57073 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SOX8P57073 AL157996.1-201ENST00000624684 2299 ntBASIC12.51□□□□□ -0.41
SOX8P57073 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SOX8P57073 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
SOX8P57073 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 AC005912.2-201ENST00000619492 2400 ntBASIC12.51□□□□□ -0.41
SOX8P57073 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.51□□□□□ -0.41
SOX8P57073 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 AL928654.5-201ENST00000624831 2501 ntBASIC12.51□□□□□ -0.41
SOX8P57073 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SOX8P57073 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.51□□□□□ -0.41
SOX8P57073 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.51□□□□□ -0.41
SOX8P57073 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.51□□□□□ -0.41
SOX8P57073 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.51□□□□□ -0.41
SOX8P57073 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 NHP2P1-201ENST00000335274 462 ntBASIC12.51□□□□□ -0.41
SOX8P57073 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.51□□□□□ -0.41
SOX8P57073 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SOX8P57073 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SOX8P57073 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC12.51□□□□□ -0.41
SOX8P57073 RPL18AP16-201ENST00000424057 531 ntBASIC12.51□□□□□ -0.41
SOX8P57073 CDCA4P4-201ENST00000435216 680 ntBASIC12.51□□□□□ -0.41
SOX8P57073 RNU1-80P-201ENST00000459500 161 ntBASIC12.51□□□□□ -0.41
SOX8P57073 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
SOX8P57073 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC12.51□□□□□ -0.41
SOX8P57073 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC12.51□□□□□ -0.41
SOX8P57073 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC12.51□□□□□ -0.41
SOX8P57073 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC12.51□□□□□ -0.41
SOX8P57073 RN7SL121P-201ENST00000584223 273 ntBASIC12.51□□□□□ -0.41
SOX8P57073 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC12.51□□□□□ -0.41
SOX8P57073 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC12.51□□□□□ -0.41
SOX8P57073 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.51□□□□□ -0.41
SOX8P57073 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SOX8P57073 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SOX8P57073 KRT8P38-201ENST00000441370 1430 ntBASIC12.51□□□□□ -0.41
SOX8P57073 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC12.51□□□□□ -0.41
SOX8P57073 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SOX8P57073 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC12.51□□□□□ -0.41
SOX8P57073 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC12.51□□□□□ -0.41
SOX8P57073 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SOX8P57073 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SOX8P57073 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SOX8P57073 PTN-202ENST00000393083 1599 ntTSL 5 BASIC12.51□□□□□ -0.41
SOX8P57073 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.51□□□□□ -0.41
SOX8P57073 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms