Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 ZBTB25-203ENST00000555424 565 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPRMP28827 AC133548.2-202ENST00000562267 148 ntBASIC19.22■□□□□ 0.67
PTPRMP28827 LINC00470-211ENST00000584492 1281 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPRMP28827 KRTAP10-9-203ENST00000616529 615 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PTPRMP28827 AL139035.1-202ENST00000626308 565 ntTSL 4 BASIC19.22■□□□□ 0.67
PTPRMP28827 RAE1-209ENST00000527947 1503 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPRMP28827 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PTPRMP28827 AGFG1-203ENST00000409171 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPRMP28827 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPRMP28827 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPRMP28827 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
PTPRMP28827 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPRMP28827 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
PTPRMP28827 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPRMP28827 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
PTPRMP28827 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PTPRMP28827 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPRMP28827 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPRMP28827 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
PTPRMP28827 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPRMP28827 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPRMP28827 CD33-202ENST00000391796 1089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPRMP28827 AL445933.2-201ENST00000440249 265 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPRMP28827 KRT19P3-201ENST00000507547 828 ntBASIC19.22■□□□□ 0.67
PTPRMP28827 DIO2-206ENST00000555750 1049 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPRMP28827 AC012146.4-201ENST00000575546 271 ntBASIC19.22■□□□□ 0.67
PTPRMP28827 MIR4763-201ENST00000581461 92 ntBASIC19.22■□□□□ 0.67
PTPRMP28827 AC090236.1-201ENST00000590318 768 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPRMP28827 MIR7847-201ENST00000610912 103 ntBASIC19.22■□□□□ 0.67
PTPRMP28827 FAM183BP-201ENST00000409072 1595 ntBASIC19.22■□□□□ 0.67
PTPRMP28827 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPRMP28827 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PTPRMP28827 DBET-201ENST00000630918 3363 ntBASIC19.21■□□□□ 0.67
PTPRMP28827 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRMP28827 MST1P2-201ENST00000457982 2291 ntBASIC19.21■□□□□ 0.67
PTPRMP28827 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRMP28827 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRMP28827 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PTPRMP28827 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPRMP28827 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PTPRMP28827 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRMP28827 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRMP28827 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPRMP28827 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRMP28827 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PTPRMP28827 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PTPRMP28827 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPRMP28827 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRMP28827 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRMP28827 LST1-206ENST00000376090 689 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPRMP28827 LST1-210ENST00000376099 610 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPRMP28827 RCL1-203ENST00000381732 804 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPRMP28827 VTI1BP2-201ENST00000394154 696 ntBASIC19.21■□□□□ 0.67
PTPRMP28827 PRKCE-202ENST00000394874 996 ntTSL 3 BASIC19.21■□□□□ 0.67
PTPRMP28827 LST1-214ENST00000418507 726 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPRMP28827 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRMP28827 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPRMP28827 AC142391.1-201ENST00000515823 1002 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PTPRMP28827 DPPA5P4-201ENST00000559021 365 ntBASIC19.21■□□□□ 0.67
PTPRMP28827 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRMP28827 AL590096.1-202ENST00000618162 580 ntTSL 3 BASIC19.21■□□□□ 0.67
PTPRMP28827 AL137785.1-201ENST00000637466 490 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPRMP28827 AC152010.1-201ENST00000415779 2006 ntBASIC19.21■□□□□ 0.67
PTPRMP28827 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPRMP28827 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPRMP28827 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRMP28827 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PTPRMP28827 MYCNOS-202ENST00000641263 1313 ntBASIC19.21■□□□□ 0.67
PTPRMP28827 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPRMP28827 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRMP28827 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPRMP28827 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPRMP28827 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRMP28827 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PTPRMP28827 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRMP28827 AC027601.5-201ENST00000624065 2482 ntBASIC19.2■□□□□ 0.66
PTPRMP28827 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRMP28827 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRMP28827 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRMP28827 HTR3D-202ENST00000382489 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRMP28827 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PTPRMP28827 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRMP28827 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRMP28827 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PTPRMP28827 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRMP28827 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPRMP28827 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRMP28827 CYTOR-202ENST00000409054 1096 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPRMP28827 AL078621.2-201ENST00000419351 698 ntBASIC19.2■□□□□ 0.66
PTPRMP28827 CHN2-209ENST00000421775 825 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRMP28827 AKR1B1P4-201ENST00000426552 922 ntBASIC19.2■□□□□ 0.66
PTPRMP28827 SNHG14-207ENST00000452731 1064 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPRMP28827 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPRMP28827 AP002383.2-201ENST00000545768 675 ntBASIC19.2■□□□□ 0.66
PTPRMP28827 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPRMP28827 AP000553.1-201ENST00000610143 430 ntBASIC19.2■□□□□ 0.66
PTPRMP28827 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPRMP28827 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PTPRMP28827 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPRMP28827 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms