Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
P04436 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
P04436 AC072061.1-201ENST00000569710 2234 ntBASIC12.54□□□□□ -0.4
P04436 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
P04436 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
P04436 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
P04436 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
P04436 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.54□□□□□ -0.4
P04436 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC12.54□□□□□ -0.4
P04436 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC12.54□□□□□ -0.4
P04436 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 GCSHP3-201ENST00000431120 391 ntBASIC12.54□□□□□ -0.4
P04436 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.54□□□□□ -0.4
P04436 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC12.54□□□□□ -0.4
P04436 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 MT2A-202ENST00000561491 581 ntTSL 2 BASIC12.54□□□□□ -0.4
P04436 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 MIR6746-201ENST00000620971 63 ntBASIC12.54□□□□□ -0.4
P04436 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
P04436 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 AC023794.5-201ENST00000564380 2157 ntBASIC12.54□□□□□ -0.4
P04436 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
P04436 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.54□□□□□ -0.4
P04436 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.54□□□□□ -0.4
P04436 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04436 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
P04436 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P04436 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.53□□□□□ -0.4
P04436 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.53□□□□□ -0.4
P04436 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.53□□□□□ -0.4
P04436 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.53□□□□□ -0.4
P04436 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.53□□□□□ -0.4
P04436 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.53□□□□□ -0.4
P04436 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC12.53□□□□□ -0.4
P04436 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC12.53□□□□□ -0.4
P04436 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.53□□□□□ -0.4
P04436 FAM21EP-201ENST00000417804 985 ntBASIC12.53□□□□□ -0.4
P04436 AP000244.1-201ENST00000424582 201 ntBASIC12.53□□□□□ -0.4
P04436 AC097065.1-201ENST00000425737 517 ntBASIC12.53□□□□□ -0.4
P04436 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.53□□□□□ -0.4
P04436 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.53□□□□□ -0.4
P04436 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC12.53□□□□□ -0.4
P04436 GALP-202ENST00000440823 889 ntTSL 5 BASIC12.53□□□□□ -0.4
P04436 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P04436 AC005077.3-201ENST00000449614 213 ntBASIC12.53□□□□□ -0.4
P04436 AC104212.2-201ENST00000478813 628 ntBASIC12.53□□□□□ -0.4
P04436 AL157792.1-201ENST00000488281 530 ntBASIC12.53□□□□□ -0.4
P04436 AC093826.1-201ENST00000508655 993 ntBASIC12.53□□□□□ -0.4
P04436 AC090136.2-201ENST00000517809 420 ntBASIC12.53□□□□□ -0.4
P04436 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC12.53□□□□□ -0.4
P04436 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms