Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
CD74P04233 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CD74P04233 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC11.56□□□□□ -0.56
CD74P04233 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC11.56□□□□□ -0.56
CD74P04233 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC11.56□□□□□ -0.56
CD74P04233 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC11.56□□□□□ -0.56
CD74P04233 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC11.56□□□□□ -0.56
CD74P04233 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 INGX-202ENST00000489074 768 ntBASIC11.56□□□□□ -0.56
CD74P04233 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC11.56□□□□□ -0.56
CD74P04233 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC11.56□□□□□ -0.56
CD74P04233 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.56□□□□□ -0.56
CD74P04233 SRP19-206ENST00000515463 660 ntTSL 3 BASIC11.56□□□□□ -0.56
CD74P04233 RPL8-205ENST00000527914 551 ntTSL 3 BASIC11.56□□□□□ -0.56
CD74P04233 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC11.56□□□□□ -0.56
CD74P04233 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC11.56□□□□□ -0.56
CD74P04233 AC100827.2-201ENST00000563214 1194 ntBASIC11.56□□□□□ -0.56
CD74P04233 PIGL-212ENST00000581006 554 ntTSL 4 BASIC11.56□□□□□ -0.56
CD74P04233 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC11.56□□□□□ -0.56
CD74P04233 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC11.56□□□□□ -0.56
CD74P04233 AC244669.2-201ENST00000612320 853 ntBASIC11.56□□□□□ -0.56
CD74P04233 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CD74P04233 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 AL162426.1-201ENST00000624141 743 ntBASIC11.56□□□□□ -0.56
CD74P04233 PTPRVP-205ENST00000641549 5067 ntBASIC11.56□□□□□ -0.56
CD74P04233 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC11.56□□□□□ -0.56
CD74P04233 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CD74P04233 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC11.56□□□□□ -0.56
CD74P04233 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
CD74P04233 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
CD74P04233 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CD74P04233 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CD74P04233 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CD74P04233 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CD74P04233 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC11.56□□□□□ -0.56
CD74P04233 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC11.56□□□□□ -0.56
CD74P04233 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC11.56□□□□□ -0.56
CD74P04233 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.56□□□□□ -0.56
CD74P04233 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC11.56□□□□□ -0.56
CD74P04233 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CD74P04233 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 AC011481.3-201ENST00000623895 5594 ntBASIC11.55□□□□□ -0.56
CD74P04233 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CD74P04233 GBP1P1-201ENST00000394662 1740 ntBASIC11.55□□□□□ -0.56
CD74P04233 DDC-204ENST00000426377 1700 ntTSL 3 BASIC11.55□□□□□ -0.56
CD74P04233 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
CD74P04233 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.55□□□□□ -0.56
CD74P04233 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC11.55□□□□□ -0.56
CD74P04233 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.55□□□□□ -0.56
CD74P04233 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
CD74P04233 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC11.55□□□□□ -0.56
CD74P04233 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.55□□□□□ -0.56
CD74P04233 HOMER2P2-201ENST00000451621 847 ntBASIC11.55□□□□□ -0.56
CD74P04233 PFN2-215ENST00000497148 743 ntTSL 4 BASIC11.55□□□□□ -0.56
CD74P04233 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.55□□□□□ -0.56
CD74P04233 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC11.55□□□□□ -0.56
CD74P04233 AC079336.7-201ENST00000623428 1078 ntBASIC11.55□□□□□ -0.56
CD74P04233 AC092299.1-201ENST00000632679 757 ntBASIC11.55□□□□□ -0.56
CD74P04233 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC11.55□□□□□ -0.56
CD74P04233 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC11.55□□□□□ -0.56
CD74P04233 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CD74P04233 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
CD74P04233 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC11.55□□□□□ -0.56
CD74P04233 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms