Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC12.29□□□□□ -0.44
APOA1P02647 AP3S2-201ENST00000336418 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC12.29□□□□□ -0.44
APOA1P02647 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
APOA1P02647 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
APOA1P02647 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC12.29□□□□□ -0.44
APOA1P02647 APC2-203ENST00000535453 11656 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.29□□□□□ -0.44
APOA1P02647 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.29□□□□□ -0.44
APOA1P02647 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.29□□□□□ -0.44
APOA1P02647 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.29□□□□□ -0.44
APOA1P02647 HMGA1P1-201ENST00000415560 1062 ntBASIC12.29□□□□□ -0.44
APOA1P02647 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.29□□□□□ -0.44
APOA1P02647 AL442647.2-201ENST00000429864 857 ntBASIC12.29□□□□□ -0.44
APOA1P02647 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 POLD2P1-201ENST00000511220 997 ntBASIC12.29□□□□□ -0.44
APOA1P02647 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 TPRX2P-201ENST00000535362 881 ntBASIC12.29□□□□□ -0.44
APOA1P02647 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.29□□□□□ -0.44
APOA1P02647 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
APOA1P02647 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.29□□□□□ -0.44
APOA1P02647 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.29□□□□□ -0.44
APOA1P02647 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.29□□□□□ -0.44
APOA1P02647 AL158211.3-201ENST00000607385 239 ntBASIC12.29□□□□□ -0.44
APOA1P02647 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.29□□□□□ -0.44
APOA1P02647 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.29□□□□□ -0.44
APOA1P02647 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.29□□□□□ -0.44
APOA1P02647 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC12.29□□□□□ -0.44
APOA1P02647 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.29□□□□□ -0.44
APOA1P02647 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
APOA1P02647 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
APOA1P02647 AL353593.1-201ENST00000602517 3955 ntBASIC12.29□□□□□ -0.44
APOA1P02647 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC12.29□□□□□ -0.44
APOA1P02647 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
APOA1P02647 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
APOA1P02647 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOA1P02647 SMCR5-201ENST00000543475 2844 ntBASIC12.29□□□□□ -0.44
APOA1P02647 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.28□□□□□ -0.44
APOA1P02647 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 IKZF4-202ENST00000431367 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
APOA1P02647 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 SCN5A-209ENST00000451551 8343 ntTSL 5 BASIC12.28□□□□□ -0.44
APOA1P02647 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
APOA1P02647 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC12.28□□□□□ -0.44
APOA1P02647 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
APOA1P02647 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.28□□□□□ -0.44
APOA1P02647 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
APOA1P02647 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 AC107890.1-201ENST00000422478 521 ntBASIC12.28□□□□□ -0.44
APOA1P02647 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.28□□□□□ -0.44
APOA1P02647 MYCLP2-201ENST00000449268 967 ntBASIC12.28□□□□□ -0.44
APOA1P02647 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.28□□□□□ -0.44
APOA1P02647 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.28□□□□□ -0.44
APOA1P02647 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 AL391280.1-201ENST00000506969 1062 ntBASIC12.28□□□□□ -0.44
APOA1P02647 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.28□□□□□ -0.44
APOA1P02647 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.28□□□□□ -0.44
APOA1P02647 AL512310.5-201ENST00000551999 515 ntBASIC12.28□□□□□ -0.44
APOA1P02647 AC023310.3-201ENST00000557027 670 ntBASIC12.28□□□□□ -0.44
APOA1P02647 AC100756.1-201ENST00000562736 682 ntBASIC12.28□□□□□ -0.44
APOA1P02647 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.28□□□□□ -0.44
APOA1P02647 AC138749.3-201ENST00000567691 622 ntBASIC12.28□□□□□ -0.44
APOA1P02647 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.28□□□□□ -0.44
APOA1P02647 AC116165.1-201ENST00000611806 668 ntBASIC12.28□□□□□ -0.44
APOA1P02647 Z92544.3-201ENST00000624747 417 ntBASIC12.28□□□□□ -0.44
APOA1P02647 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOA1P02647 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms