Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 RPL3P2-204ENST00000413027 1203 ntBASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 AC108734.2-201ENST00000420887 1069 ntBASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 STK24P1-201ENST00000455035 1291 ntBASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 EEF1GP8-201ENST00000506566 1154 ntBASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 AL132994.1-201ENST00000554098 400 ntBASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 C2orf69P1-201ENST00000563532 1093 ntBASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 AL009176.1-201ENST00000607876 650 ntBASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 AC010976.2-201ENST00000609697 852 ntBASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 AL031673.1-201ENST00000611460 466 ntBASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 AC138466.4-201ENST00000623965 852 ntBASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 AC130686.1-201ENST00000622936 2466 ntBASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPA3F8WFD2 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 AC015909.5-201ENST00000624336 2266 ntBASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 AL122018.1-201ENST00000446607 2310 ntBASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 GCSHP3-201ENST00000431120 391 ntBASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPA3F8WFD2 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPA3F8WFD2 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms