Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC087499.6-201ENST00000411576 835 ntBASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 COX5BP1-201ENST00000507622 393 ntBASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 CR383656.12-201ENST00000549567 513 ntBASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 MIR5189-201ENST00000577370 114 ntBASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 AC015967.2-201ENST00000624092 234 ntBASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 AC006435.4-201ENST00000625037 234 ntBASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 AL356737.1-201ENST00000634391 234 ntBASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 AC079781.4-201ENST00000641908 219 ntBASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 GUCY2EP-203ENST00000531117 1918 ntBASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RCL1Q9Y2P8 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 AC087164.2-201ENST00000624514 3130 ntBASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 RGS5-214ENST00000429865 754 ntTSL 3 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 AC003686.1-201ENST00000550956 1034 ntBASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RCL1Q9Y2P8 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms