Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 AL031713.1-201ENST00000564813 661 ntBASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 AC111170.3-201ENST00000624282 2464 ntBASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PARPBPQ9NWS1 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
PARPBPQ9NWS1 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.4□□□□□ -0.43
PARPBPQ9NWS1 AF013593.1-201ENST00000458074 1487 ntBASIC12.4□□□□□ -0.43
PARPBPQ9NWS1 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
PARPBPQ9NWS1 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.4□□□□□ -0.43
PARPBPQ9NWS1 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
PARPBPQ9NWS1 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 NUTM2HP-201ENST00000442076 2498 ntBASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 AC007279.1-201ENST00000448547 837 ntBASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 OR5BD1P-201ENST00000532527 817 ntBASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 AL359091.4-201ENST00000610052 409 ntBASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 AC023794.5-201ENST00000564380 2157 ntBASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
PARPBPQ9NWS1 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PARPBPQ9NWS1 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.38□□□□□ -0.43
PARPBPQ9NWS1 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PARPBPQ9NWS1 AC093462.1-201ENST00000621167 1683 ntBASIC12.38□□□□□ -0.43
PARPBPQ9NWS1 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms