Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 AP000356.3-201ENST00000382243 753 ntBASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 AL627422.1-201ENST00000434104 580 ntBASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 ERP29P1-201ENST00000442902 706 ntBASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 ORAOV1P1-201ENST00000503108 395 ntBASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 AC138701.2-201ENST00000553634 226 ntBASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 MIR4649-201ENST00000582839 64 ntBASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 AC005632.3-201ENST00000605544 308 ntBASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CUEDC1Q9NWM3 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CUEDC1Q9NWM3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 PPT1-213ENST00000641319 2388 ntBASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 AC092053.3-201ENST00000641308 4975 ntBASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 AL603841.1-201ENST00000430516 664 ntBASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 AC092573.1-201ENST00000433054 884 ntBASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 EEF1DP2-201ENST00000433698 843 ntBASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 AC141586.1-203ENST00000567242 366 ntBASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 AL049840.2-201ENST00000602722 535 ntBASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 AC138894.2-201ENST00000602838 371 ntBASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 AC019109.1-201ENST00000401725 1874 ntBASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 AC020917.4-201ENST00000623994 1999 ntBASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CUEDC1Q9NWM3 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms