Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC10.51□□□□□ -0.73
VGLL1Q99990 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC10.51□□□□□ -0.73
VGLL1Q99990 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC10.51□□□□□ -0.73
VGLL1Q99990 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
VGLL1Q99990 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC10.51□□□□□ -0.73
VGLL1Q99990 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
VGLL1Q99990 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
VGLL1Q99990 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 AR-208ENST00000612452 10676 ntTSL 5 BASIC10.51□□□□□ -0.73
VGLL1Q99990 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
VGLL1Q99990 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
VGLL1Q99990 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
VGLL1Q99990 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
VGLL1Q99990 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC10.51□□□□□ -0.73
VGLL1Q99990 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
VGLL1Q99990 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC10.5□□□□□ -0.73
VGLL1Q99990 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC10.5□□□□□ -0.73
VGLL1Q99990 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC10.5□□□□□ -0.73
VGLL1Q99990 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC10.5□□□□□ -0.73
VGLL1Q99990 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 AC099521.2-201ENST00000619354 2036 ntBASIC10.5□□□□□ -0.73
VGLL1Q99990 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 AC020763.3-201ENST00000625095 2904 ntBASIC10.5□□□□□ -0.73
VGLL1Q99990 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
VGLL1Q99990 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
VGLL1Q99990 MXI1-205ENST00000393134 889 ntTSL 2 BASIC10.5□□□□□ -0.73
VGLL1Q99990 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC10.5□□□□□ -0.73
VGLL1Q99990 VDAC1P1-201ENST00000439229 848 ntBASIC10.5□□□□□ -0.73
VGLL1Q99990 AC234783.1-201ENST00000441761 496 ntBASIC10.5□□□□□ -0.73
VGLL1Q99990 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC10.5□□□□□ -0.73
VGLL1Q99990 EIF4HP1-201ENST00000453115 687 ntBASIC10.5□□□□□ -0.73
VGLL1Q99990 RNMTL1P1-201ENST00000454103 560 ntBASIC10.5□□□□□ -0.73
VGLL1Q99990 AC021723.1-201ENST00000486306 515 ntBASIC10.5□□□□□ -0.73
VGLL1Q99990 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 CHCHD2P2-201ENST00000503744 321 ntBASIC10.5□□□□□ -0.73
VGLL1Q99990 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC10.5□□□□□ -0.73
VGLL1Q99990 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC10.5□□□□□ -0.73
VGLL1Q99990 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC10.5□□□□□ -0.73
VGLL1Q99990 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC10.5□□□□□ -0.73
VGLL1Q99990 APOC4-201ENST00000591600 348 ntTSL 3 BASIC10.5□□□□□ -0.73
VGLL1Q99990 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
VGLL1Q99990 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC10.5□□□□□ -0.73
VGLL1Q99990 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
VGLL1Q99990 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
VGLL1Q99990 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
VGLL1Q99990 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC10.5□□□□□ -0.73
VGLL1Q99990 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
VGLL1Q99990 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
VGLL1Q99990 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC10.5□□□□□ -0.73
VGLL1Q99990 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
VGLL1Q99990 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC10.5□□□□□ -0.73
VGLL1Q99990 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 FAM90A7P-201ENST00000382628 1395 ntBASIC10.5□□□□□ -0.73
VGLL1Q99990 FAM90A23P-201ENST00000400136 1395 ntBASIC10.5□□□□□ -0.73
VGLL1Q99990 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC10.5□□□□□ -0.73
VGLL1Q99990 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VGLL1Q99990 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
VGLL1Q99990 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
VGLL1Q99990 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
VGLL1Q99990 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
VGLL1Q99990 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
VGLL1Q99990 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 RAN-210ENST00000541630 1475 ntTSL 2 BASIC10.49□□□□□ -0.73
VGLL1Q99990 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VGLL1Q99990 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms