Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 RPL14-203ENST00000416518 812 ntTSL 3 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 MAGEA7P-201ENST00000436482 942 ntBASIC14.64□□□□□ -0.07
RNF135Q8IUD6 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 IGKV1OR-2-201ENST00000457995 350 ntBASIC14.64□□□□□ -0.07
RNF135Q8IUD6 RN7SL788P-201ENST00000460504 316 ntBASIC14.64□□□□□ -0.07
RNF135Q8IUD6 AC092903.1-201ENST00000466506 262 ntBASIC14.64□□□□□ -0.07
RNF135Q8IUD6 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 CTBP2P6-201ENST00000526402 1229 ntBASIC14.64□□□□□ -0.07
RNF135Q8IUD6 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 KLF17P1-201ENST00000547105 1126 ntBASIC14.64□□□□□ -0.07
RNF135Q8IUD6 AC004801.1-201ENST00000549557 360 ntBASIC14.64□□□□□ -0.07
RNF135Q8IUD6 DLK1-205ENST00000556051 469 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 AC091304.3-201ENST00000566500 716 ntBASIC14.64□□□□□ -0.07
RNF135Q8IUD6 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 AC006116.2-201ENST00000589958 988 ntBASIC14.64□□□□□ -0.07
RNF135Q8IUD6 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 GGNBP1-204ENST00000613113 887 ntBASIC14.64□□□□□ -0.07
RNF135Q8IUD6 AC004466.2-201ENST00000614749 516 ntBASIC14.64□□□□□ -0.07
RNF135Q8IUD6 AC091769.1-201ENST00000619576 568 ntBASIC14.64□□□□□ -0.07
RNF135Q8IUD6 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 AC011474.4-201ENST00000623523 2076 ntBASIC14.64□□□□□ -0.07
RNF135Q8IUD6 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF135Q8IUD6 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 AL022313.4-201ENST00000562756 2046 ntBASIC14.63□□□□□ -0.07
RNF135Q8IUD6 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.63□□□□□ -0.07
RNF135Q8IUD6 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 FAU-201ENST00000279259 461 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 AHCYP3-201ENST00000420053 1279 ntBASIC14.63□□□□□ -0.07
RNF135Q8IUD6 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 GPX3-202ENST00000517973 612 ntTSL 3 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 AC087203.1-201ENST00000532111 1181 ntBASIC14.63□□□□□ -0.07
RNF135Q8IUD6 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 AL132994.1-201ENST00000554098 400 ntBASIC14.63□□□□□ -0.07
RNF135Q8IUD6 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 AC005274.1-201ENST00000623460 802 ntBASIC14.63□□□□□ -0.07
RNF135Q8IUD6 AC020904.3-201ENST00000624199 442 ntBASIC14.63□□□□□ -0.07
RNF135Q8IUD6 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 AC079781.5-202ENST00000641784 3743 ntBASIC14.63□□□□□ -0.07
RNF135Q8IUD6 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF135Q8IUD6 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms